4GIR - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Title :   CRYSTAL STRUCTURE OF AN ENOLASE FAMILY MEMBER FROM VIBRIO HARVEYI (EFI-TARGET 501692) WITH HOMOLOGY TO MANNONATE DEHYDRATASE, WITH MG, ETHYLENE GLYCOL AND SULFATE BOUND (ORDERED LOOPS, SPACE GROUP P41212)

Authors :   M. W. Vetting, R. Toro, R. Bhosle, N. F. Al Obaidi, L. L. Morisco, S. R. Wa S. Sojitra, E. Washington, A. Scott Glenn, S. Chowdhury, B. Evans, J. B. Hillerich, J. Love, R. D. Seidel, H. J. Imker, J. A. Gerlt, S. C. Almo, Function Initiative (Efi)

Date :   08 Aug 12 (Deposition) - 29 Aug 12 (Release) - 29 Aug 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.00

Chains :   Asym. Unit : A,B,C,D
Biol. Unit 1: A,B,C,D  (2x)

Keywords :   Enolase, Putative Mannonate Dehydratase, Enzyme Function Initiative, Efi, Structural Genomics, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. W. Vetting, R. Toro, R. Bhosle, N. F. Al Obaidi, L. L. Morisco, S. R. Wasserman, S. Sojitra, E. Washington, A. Scott Glenn, S. Chowdhury, B. Evans, J. Hammonds, B. Hillerich, J. Love, R. D. Seidel, H. J. Imker, J. A. Gerlt, S. C. Almo, Enzyme Function Initiative (Efi)
Crystal Structure Of An Enolase Family Member From Vibrio Harveyi (Efi-Target 501692) With Homology To Mannonate Dehydratase, With Mg, Ethylene Glycol And Sulfate Bound (Ordered Loops, Space Group P41212)
To Be Published
PubMed: search

Molecule 1 - ENOLASE
	Chains	:	A, B, C, D
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Gene	:	VME_00770
	Organism Scientific	:	VIBRIO HARVEYI
	Organism Taxid	:	673519
	Strain	:	1DA3

		1	2	3	4
Asymmetric Unit	:	A	B	C	D
Biological Unit 1 (2x)	:	A	B	C	D

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (5, 23)

No.	Name	Count	Type	Full Name
1	CL	9	Ligand/Ion	CHLORIDE ION
2	EDO	5	Ligand/Ion	1,2-ETHANEDIOL
3	MG	4	Ligand/Ion	MAGNESIUM ION
4	NA	1	Ligand/Ion	SODIUM ION
5	SO4	4	Ligand/Ion	SULFATE ION

Biological Unit 1 (2, 18)

No.	Name	Count	Type	Full Name
1	CL	-1	Ligand/Ion	CHLORIDE ION
2	EDO	10	Ligand/Ion	1,2-ETHANEDIOL
3	MG	-1	Ligand/Ion	MAGNESIUM ION
4	NA	-1	Ligand/Ion	SODIUM ION
5	SO4	8	Ligand/Ion	SULFATE ION

Asymmetric Unit (23, 23)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP A:205 , GLU A:231 , GLU A:257 , HOH A:501 , HOH A:502 , HOH A:503	BINDING SITE FOR RESIDUE MG A 401
02	AC2	SOFTWARE	ARG A:18 , HIS A:19 , GLN A:41 , ARG A:382 , HIS A:384 , TRP A:386	BINDING SITE FOR RESIDUE SO4 A 402
03	AC3	SOFTWARE	ASP A:393	BINDING SITE FOR RESIDUE CL A 403
04	AC4	SOFTWARE	HIS A:384	BINDING SITE FOR RESIDUE CL A 404
05	AC5	SOFTWARE	GLN A:41 , GLN A:42 , HIS A:307 , PRO A:309 , ASP A:311 , TRP B:80	BINDING SITE FOR RESIDUE EDO A 405
06	AC6	SOFTWARE	ASP B:205 , GLU B:231 , GLU B:257 , HOH B:501 , HOH B:502 , HOH B:503	BINDING SITE FOR RESIDUE MG B 401
07	AC7	SOFTWARE	ASN A:247 , ASN B:247 , ASN C:247 , ASN D:247 , HOH D:567	BINDING SITE FOR RESIDUE NA B 402
08	AC8	SOFTWARE	ARG B:18 , HIS B:19 , GLN B:41 , ARG B:382 , HIS B:384 , TRP B:386	BINDING SITE FOR RESIDUE SO4 B 403
09	AC9	SOFTWARE	HIS B:384	BINDING SITE FOR RESIDUE CL B 404
10	BC1	SOFTWARE	PRO B:392 , ASP B:393	BINDING SITE FOR RESIDUE CL B 405
11	BC2	SOFTWARE	TRP A:80 , GLN B:41 , GLN B:42 , HIS B:307 , PRO B:309 , ASP B:311	BINDING SITE FOR RESIDUE EDO B 406
12	BC3	SOFTWARE	GLU B:385 , TRP B:386	BINDING SITE FOR RESIDUE CL B 407
13	BC4	SOFTWARE	ALA B:340	BINDING SITE FOR RESIDUE CL B 408
14	BC5	SOFTWARE	ASP C:205 , GLU C:231 , GLU C:257 , HOH C:501 , HOH C:502 , HOH C:503	BINDING SITE FOR RESIDUE MG C 401
15	BC6	SOFTWARE	ARG C:18 , HIS C:19 , GLN C:41 , ARG C:382 , HIS C:384 , TRP C:386	BINDING SITE FOR RESIDUE SO4 C 402
16	BC7	SOFTWARE	PRO C:383 , HIS C:384	BINDING SITE FOR RESIDUE CL C 403
17	BC8	SOFTWARE	GLN C:41 , GLN C:42 , HIS C:307 , PRO C:309 , ASP C:311 , TYR D:79 , TRP D:80	BINDING SITE FOR RESIDUE EDO C 404
18	BC9	SOFTWARE	ASP D:205 , GLU D:231 , GLU D:257 , HOH D:501 , HOH D:502 , HOH D:503	BINDING SITE FOR RESIDUE MG D 401
19	CC1	SOFTWARE	ARG D:18 , HIS D:19 , GLN D:41 , ARG D:382 , HIS D:384 , TRP D:386	BINDING SITE FOR RESIDUE SO4 D 402
20	CC2	SOFTWARE	HIS D:384	BINDING SITE FOR RESIDUE CL D 403
21	CC3	SOFTWARE	TYR C:79 , TRP C:80 , GLN D:41 , GLN D:42 , HIS D:307 , PRO D:309 , ASP D:311	BINDING SITE FOR RESIDUE EDO D 404
22	CC4	SOFTWARE	LYS D:339 , ALA D:340	BINDING SITE FOR RESIDUE CL D 405
23	CC5	SOFTWARE	ASN C:66 , ASP C:69 , SER C:117 , ARG C:118 , ASP C:119 , THR D:171 , GLY D:394	BINDING SITE FOR RESIDUE EDO D 406

(no "SS Bond" information available for 4GIR)

(no "Cis Peptide Bond" information available for 4GIR)

(no "SAP(SNP)/Variant" information available for 4GIR)

(no "PROSITE Motif" information available for 4GIR)

(no "Exon" information available for 4GIR)

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:397
                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeee......eeeeeeee....eeeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhh......eeeeeeeee.hhhhhhhhhhhhhhh...eeeeee...................ee.hhhhhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eee...hhhhhhhhhhhhh.....eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhhhh.ee........hhhhhhhhhhhhhhh.....ee....hhhhhhhh.........ee............hhhhhhh.......hhhh.ee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gir A   3 KNTISNIECVITKPDRHNLITVIVETESGVTGYGCATFQQRPLAVKTMVDEYLKPLLIGKDANNIEDLWQMMMVNAYWRNGPVINNAISGVDMALWDIKAKIANMPLHQLFGGKSRDAIQVYTHATSDTMEGLYEQVDKYLEQGYQHIRCQLGFYGGVPENIQTAQNPTQGSYYDQDQYIENTVEMFKNLREKYGKQFHILHDVHERLFPNQAIQFAKQIEQYNPFFIEDILPPSQTEWLDNIRNQSSVSLALGELFNNPEEWKALIINRRVDFIRCHVSQIGGITPALKLGHFCESFGVRIAWHCPPDMTPIGAAVNTHLNVHLHNAAIQEHVEYKANTQRVFPNAAEPINGYLYASEIAGIGVEMDREAAQDFPVEYRPHEWTQSRLPDGSIHTP 399
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392

Chain B from PDB  Type:PROTEIN  Length:411
                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhh...eeeeeeeee......eeeeeeee....eeeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhh......eeeeeeeee.hhhhhhhhhhhhhhh...eeeeee...................ee.hhhhhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eee...hhhhhhhhhhhhh.....eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhhh..ee........hhhhhhhhhhhhhhh....eee....hhhhhhhh.........ee............hhhhhhh.......hhhh.ee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gir B -11 DLGTENLYFQSMMNKNTISNIECVITKPDRHNLITVIVETESGVTGYGCATFQQRPLAVKTMVDEYLKPLLIGKDANNIEDLWQMMMVNAYWRNGPVINNAISGVDMALWDIKAKIANMPLHQLFGGKSRDAIQVYTHATSDTMEGLYEQVDKYLEQGYQHIRCQLGFYGGVPENIQTAQNPTQGSYYDQDQYIENTVEMFKNLREKYGKQFHILHDVHERLFPNQAIQFAKQIEQYNPFFIEDILPPSQTEWLDNIRNQSSVSLALGELFNNPEEWKALIINRRVDFIRCHVSQIGGITPALKLGHFCESFGVRIAWHCPPDMTPIGAAVNTHLNVHLHNAAIQEHVEYKANTQRVFPNAAEPINGYLYASEIAGIGVEMDREAAQDFPVEYRPHEWTQSRLPDGSIHTP 399
                                    -2         8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358       368       378       388       398

Chain C from PDB  Type:PROTEIN  Length:397
                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeee......eeeeeeee....eeeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhh......eeeeeeeee.hhhhhhhhhhhhhhh...eeeeee...................ee.hhhhhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eee...hhhhhhhhhhhhh.....eee.....hhhhhhhhhhh....ee..hhhhhhhhhhhhhhhhhhhhh..ee........hhhhhhhhhhhhhhh.....ee....hhhhhhhh.........ee............hhhhhhh.......hhhh.ee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gir C   3 KNTISNIECVITKPDRHNLITVIVETESGVTGYGCATFQQRPLAVKTMVDEYLKPLLIGKDANNIEDLWQMMMVNAYWRNGPVINNAISGVDMALWDIKAKIANMPLHQLFGGKSRDAIQVYTHATSDTMEGLYEQVDKYLEQGYQHIRCQLGFYGGVPENIQTAQNPTQGSYYDQDQYIENTVEMFKNLREKYGKQFHILHDVHERLFPNQAIQFAKQIEQYNPFFIEDILPPSQTEWLDNIRNQSSVSLALGELFNNPEEWKALIINRRVDFIRCHVSQIGGITPALKLGHFCESFGVRIAWHCPPDMTPIGAAVNTHLNVHLHNAAIQEHVEYKANTQRVFPNAAEPINGYLYASEIAGIGVEMDREAAQDFPVEYRPHEWTQSRLPDGSIHTP 399
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392

Chain D from PDB  Type:PROTEIN  Length:408
                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh..eeeeeeeee......eeeeeeee.....eeee.....hhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh..hhhhhh.......eeeeeeeee.hhhhhhhhhhhhhhhh..eeeeee................ee.hhhhhhhhhhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh..eee...hhhhhhhhhhhhh.....eee.....hhhhhhhhhhh....ee..hhhhh.hhhhhhhhhhhhhhh..ee........hhhhhhhhhhhhhhh.....ee....hhhhhhhh.........ee............hhhhhh........hhhh.ee......... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4gir D -11 DLGTENLYFQSMMNKNTISNIECVITKPDRHNLITVIVETESGVTGYGCATFQQRPLAVKTMVDEYLKPLLIGKDANNIEDLWQMMMVNAYWRNGPVINNAISGVDMALWDIKAKIANMPLHQLFGGKSRDAIQVYTHATSDTMEGLYEQVDKYLEQGYQHIRCQLGFYPENIQTAQNPTQGSYYDQDQYIENTVEMFKNLREKYGKQFHILHDVHERLFPNQAIQFAKQIEQYNPFFIEDILPPSQTEWLDNIRNQSSVSLALGELFNNPEEWKALIINRRVDFIRCHVSQIGGITPALKLGHFCESFGVRIAWHCPPDMTPIGAAVNTHLNVHLHNAAIQEHVEYKANTQRVFPNAAEPINGYLYASEIAGIGVEMDREAAQDFPVEYRPHEWTQSRLPDGSIHTP 399
                                    -2         8        18        28        38        48        58        68        78        88        98       108       118       128       138       148       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391        
                                                                                                                                                                                                  157|                                                                                                                                                                                                                                              
                                                                                                                                                                                                   161

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 4GIR)

(no "CATH Domain" information available for 4GIR)

(no "Pfam Domain" information available for 4GIR)

Asymmetric Unit(hide GO term definitions)

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		CL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		EDO	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		MG	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		NA	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		SO4	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]
		BC8	[ RasMol ]	+environment [ RasMol ]
		BC9	[ RasMol ]	+environment [ RasMol ]
		CC1	[ RasMol ]	+environment [ RasMol ]
		CC2	[ RasMol ]	+environment [ RasMol ]
		CC3	[ RasMol ]	+environment [ RasMol ]
		CC4	[ RasMol ]	+environment [ RasMol ]
		CC5	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 4gir)

Biological Unit
	Complete Structure
		Biological Unit 1	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	4gir
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	IMAND_VIBH1 \| D0X4R4
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	(no 'Enzyme Classificator' available)
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	IMAND_VIBH1 \| D0X4R4
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	IMAND_VIBH1 \| D0X4R4	:	4ggh 4gis

(no "Related Entries Specified in the PDB File" available for 4GIR)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (5, 23)

Sites (23, 23)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (5, 5)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File