4GB7 - JenaLib

Title :   PUTATIVE 6-AMINOHEXANOATE-DIMER HYDROLASE FROM BACILLUS ANTHRACIS

Authors :   J. Osipiuk, M. Zhou, K. Kwon, W. F. Anderson, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)

Date :   26 Jul 12 (Deposition) - 08 Aug 12 (Release) - 08 Aug 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.60

Chains :   Asym./Biol. Unit : A

Keywords :   Structural Genomics, Idp05595, 6-Aminohexanoate, Hydrolase, Niaid, National Institute Of Allergy And Infectious Diseases, Center For Structural Genomics Of Infectious Diseases, Csgid (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. Osipiuk, M. Zhou, K. Kwon, W. F. Anderson, A. Joachimiak
Putative 6-Aminohexanoate-Dimer Hydrolase From Bacillus Anthracis.
To Be Published
PubMed: search

Compounds

Molecule 1 - 6-AMINOHEXANOATE-DIMER HYDROLASE
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PMCSG7
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Gene	:	BAS3101, BA_3346, GBAA_3346
	Organism Common	:	ANTHRAX,ANTHRAX BACTERIUM
	Organism Scientific	:	BACILLUS ANTHRACIS
	Organism Taxid	:	198094
	Strain	:	AMES

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 13)

Asymmetric/Biological Unit (3, 13)

No.	Name	Count	Type	Full Name
1	EDO	1	Ligand/Ion	1,2-ETHANEDIOL
2	MSE	10	Mod. Amino Acid	SELENOMETHIONINE
3	NO3	2	Ligand/Ion	NITRATE ION

Sites (3, 3)

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	SER A:137 , TYR A:246 , TRP A:357 , LEU A:369 , GLY A:370 , SER A:371 , HOH A:737 , HOH A:1075	BINDING SITE FOR RESIDUE NO3 A 601
2	AC2	SOFTWARE	ARG A:91 , ASN A:115 , GLY A:116 , GLN A:312 , ASN A:316 , LYS A:383 , HOH A:866	BINDING SITE FOR RESIDUE NO3 A 602
3	AC3	SOFTWARE	LYS A:58 , GLU A:59 , PHE A:60 , THR A:61 , HOH A:1135	BINDING SITE FOR RESIDUE EDO A 603

SS Bonds (0, 0)

Cis Peptide Bonds (1, 1)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:388
                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................hhhhhhhhhhhhh..eeee....................eeeee..eeeehhhhhhhh.eeeeeeee..eeeeeee.........ee.hhhhhhhhhhhhhhhhhh.......hhhhhhhhhh.hhhhhhhhhhhhh...eee...........hhhhhhhhhhh.............hhhhhhhh.eeee........hhhhhhhhhhhhhhhhh.hhhhhhhhhh.........eeee............eeehhhhhhhhhhhhhh..ee..ee...hhhhhhhhh..............eee..eee.......eeeee...eeeeee....eeeeeee.......hhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gb7 A  32 TTPSKNNVTKKNWLDDPYLRWSYTHmKEFTLINDVKNNPDQIARFPSALQNLDDFAVQRRFGSATPLKELLDDNKTDAFVVVHNGQLVYERYFNGYNESEPHGmASLAKVFTGAIIQSLAEENRIDLEKTADTYIKELKNTPFGKATLQQLmDmQVSVEYPTHGYEHPALENQDAQLYLASNILPRDKNYDGPmKIYDmLQEAKETAPPGSVFSYNNGSTETLAWIIRTITGKSLAENVSERIWSQIGmEENAYYVTDETKIEQASAGLNATARDmARFGQLLLNNGEYNGKQILPSSITEDIKNVQEGELAIGPGASISYHNQWWIPHNEQGAFEVLGSYGQTLYIDPKAKmVIVHFSSNATPSNEIHSVYSNmYIDIAHHLEKLPQ 419
                                    41        51     |  61        71        81        91       101       111       121       131   |   141       151       161       171       181 | |   191       201       211       221   |   231       241       251       261       271       281       291       301     | 311       321       331       341       351       361       371       381  |    391       401    |  411        
                                                    57-MSE                                                                       135-MSE                                         183-MSE                                   225-MSE|                                               280-MSE                    307-MSE                                                                      384-MSE               406-MSE         
                                                                                                                                                                                   185-MSE                                      230-MSE

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (3, 3)

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	Cis Peptide Bonds
		Asp A:47 - Pro A:48	[ RasMol ]

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Description