4G3A - JenaLib

Title :   CRYSTAL STRUCTURE OF MAST/ORBIT N-TERMINAL DOMAIN

Authors :   T. De La Mora-Rey

Date :   13 Jul 12 (Deposition) - 17 Jul 13 (Release) - 17 Jul 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.99

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Tog Domain, Heat Repeat, Map Protein, Microtubule, Cell Cycle (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   T. De La Mora-Rey, B. D. Guenther, B. C. Finzel
The Structure Of The Tog-Like Domain Of Drosophila Melanogaster Mast/Orbit.
Acta Crystallogr. , Sect. F V. 69 723 2013
PubMed-ID: 23832196 | Reference-DOI: 10.1107/S1744309113015182

Compounds

Molecule 1 - CLIP-ASSOCIATING PROTEIN
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET-29B(+)
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Fragment	:	UNP RESIDUES 1-240
	Gene	:	CG32435, CHB, CLASP, MAST, MESR7, ORBIT
	Organism Common	:	FRUIT FLY
	Organism Scientific	:	DROSOPHILA MELANOGASTER
	Organism Taxid	:	7227
	Synonym	:	MISEXPRESSION SUPPRESSOR OF RAS 7, PROTEIN MULTIPLE ASTERS, MAST, PROTEIN ORBIT, PROTEIN CHROMOSOME BOWS

Structural Features

Chains, Units

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (2, 16)

Asymmetric Unit (2, 16)

No.	Name	Count	Type	Full Name
1	GOL	2	Ligand/Ion	GLYCEROL
2	MSE	14	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 1 (1, 7)

No.	Name	Count	Type	Full Name
1	GOL	-1	Ligand/Ion	GLYCEROL
2	MSE	7	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 2 (2, 9)

No.	Name	Count	Type	Full Name
1	GOL	2	Ligand/Ion	GLYCEROL
2	MSE	7	Mod. Amino Acid	SELENOMETHIONINE

Sites (2, 2)

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	MSE B:118 , GLU B:119 , TYR B:159 , GLN B:163	BINDING SITE FOR RESIDUE GOL B 401
2	AC2	SOFTWARE	ALA A:133 , PHE A:137 , VAL B:43 , CYS B:44 , MSE B:47 , HOH B:545 , HOH B:584 , HOH B:611	BINDING SITE FOR RESIDUE GOL B 402

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:227
                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhh...hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.hhhhhhhh....hhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4g3a A   5 KPSDLDGFIQQmPKADmRVKVQLAEDLVTFLSDDTNSIVCTDmGFLIDGLmPWLTGSHFKIAQKSLEAFSELIKRLGSDFNAYTATVLPHVIDRLGDSRDTVREKAQLLLRDLmEHRVLPPQALIDKLATSCFKHKNAKVREEFLQTIVNALHEYGTQQLSVRVYIPPVCALLGDPTVNVREAAIQTLVEIYKHVGDRLRPDLRRmDDVPASKLAmLEQKFDQVKLE 231
                                    14 |    | 24        34        44  |     54|       64        74        84        94       104       114   |   124       134       144       154       164       174       184       194       204     | 214     | 224       
                                      16-MSE|                        47-MSE  55-MSE                                                        118-MSE                                                                                     210-MSE   220-MSE       
                                           21-MSE

Chain B from PDB  Type:PROTEIN  Length:234
                                                                                                                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhh...hhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhh.hhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4g3a B   2 AYRKPSDLDGFIQQmPKADmRVKVQLAEDLVTFLSDDTNSIVCTDmGFLIDGLmPWLTGSHFKIAQKSLEAFSELIKRLGSDFNAYTATVLPHVIDRLGDSRDTVREKAQLLLRDLmEHRVLPPQALIDKLATSCFKHKNAKVREEFLQTIVNALHEYGTQQLSVRVYIPPVCALLGDPTVNVREAAIQTLVEIYKHVGDRLRPDLRRmDDVPASKLAmLEQKFDQVKLEHHHH 235
                                    11    |   21        31        41     |  51   |    61        71        81        91       101       111      |121       131       141       151       161       171       181       191       201       211       221       231    
                                         16-MSE|                        47-MSE  55-MSE                                                        118-MSE                                                                                     210-MSE   220-MSE           
                                              21-MSE

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (43, 43)

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	Cis Peptide Bonds
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Biological Units
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		Biological Unit 2	[ Jena3D ]

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