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(-) Description

Title :  CRYSTAL STRUCTURE OF A LEUCINE-RICH REPEAT PROTEIN (BACOVA_04585) FROM BACTEROIDES OVATUS ATCC 8483 AT 1.19 A RESOLUTION
 
Authors :  Joint Center For Structural Genomics (Jcsg)
Date :  27 Jun 12  (Deposition) - 19 Sep 12  (Release) - 24 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.19
Chains :  Asym./Biol. Unit :  A
Keywords :  Leucine-Rich Repeats, Protein Binding, Extracellular Protein, Structural Genomics, Joint Center For Structural Genomics, Jcsg, Protein Structure Initiative, Psi-Biology (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Joint Center For Structural Genomics (Jcsg)
Crystal Structure Of A Hypothetical Leucine Rich Repeat Protein (Bacova_04585) From Bacteroides Ovatus Atcc 8483 At 1. 19 A Resolution
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Atcc: 8483
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: SPEEDET
    Expression System Strain: PB1
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 22-414
    Gene: BACOVA_04585
    Organism Scientific: BACTEROIDES OVATUS
    Organism Taxid: 411476

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 6)

Asymmetric/Biological Unit (2, 6)
No.NameCountTypeFull Name
1EDO2Ligand/Ion1,2-ETHANEDIOL
2MSE4Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE A:98 , PRO A:99 , SER A:100 , ASN A:120 , GLU A:231 , ASN A:232 , HOH A:723 , HOH A:742 , HOH A:814BINDING SITE FOR RESIDUE EDO A 501
2AC2SOFTWARELEU A:285 , ARG A:286 , ILE A:287 , SER A:305 , VAL A:306 , ILE A:307 , HOH A:1163BINDING SITE FOR RESIDUE EDO A 502

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4FS7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4FS7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4FS7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4FS7)

(-) Exons   (0, 0)

(no "Exon" information available for 4FS7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:383
                                                                                                                                                                                                                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee..eeeee.....eeeeeee......eeee...eeee..eeeeeeee..........eeeee......ee............ee.......ee.....................ee...........eee......ee............eee......ee.....................ee.....................ee...........eeee.....ee............eeee.....ee............eeee...ee............eeee.....ee............ee.......ee............ee.......ee............eeeee.hhhhhhhhh....eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4fs7 A  22 YDFVIDEITYNFTKEHGTVEVSGLREFLNPLVVNIPPVVTYKDNKYDVVSIGYAAFQGCRKVTEIKIPSTVREIGEFAFENCSKLEIINIPDSVKmIGRCTFSGCYALKSILLPLmLKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSmETLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENmEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDSVKFIGEEAFESCTSLVSIDLPYLVEEIGKRSFRGCTSLSNINFPLSLRKIGANAFQGCINLKKVELPKRLEQYRYDFEDTTKFKWIK 414
                                    31        41        61        71        81        91       101       111       121     | 131       141     | 151       161       171       181       191 |     201       211       221       231 |     241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411   
                                                       50|                                                               127-MSE             147-MSE                                       193-MSE                                 233-MSE                                                                                                                                                                                 
                                                        61
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4FS7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4FS7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4FS7)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 4FS7)

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