4FOJ - JenaLib

Title :   1.55 A CRYSTAL STRUCTURE OF XANTHOMONAS CITRI FIMX EAL DOMAIN IN COMPLEX WITH C-DIGMP

Authors :   C. S. Farah, C. R. Guzzo

Date :   20 Jun 12 (Deposition) - 27 Mar 13 (Release) - 12 Jun 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.55

Chains :   Asym./Biol. Unit : A

Keywords :   Tim Like Barrel, Beta-(Beta/Alpha)6-Beta, C-Di-Gmp Binding, Type Iv Pilus Assembly, Pilz, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. R. Guzzo, G. Dunger, R. K. Salinas, C. S. Farah
Structure Of The Pilz-Fimxeal-C-Di-Gmp Complex Responsible For The Regulation Of Bacterial Type Iv Pilus Biogenesis.
J. Mol. Biol. V. 425 2174 2013
PubMed-ID: 23507310 | Reference-DOI: 10.1016/J.JMB.2013.03.021

Compounds

Molecule 1 - FIMX
	Chains	:	A
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET3A
	Expression System Strain	:	BL21(DE3)PLYSS
	Expression System Taxid	:	469008
	Expression System Vector Type	:	PLASMID
	Fragment	:	EAL DOMAIN (UNP RESIDUES 426-689)
	Gene	:	XAC2398
	Organism Scientific	:	XANTHOMONAS AXONOPODIS PV. CITRI
	Organism Taxid	:	190486
	Strain	:	306

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 1)

Asymmetric/Biological Unit (1, 1)

No.	Name	Count	Type	Full Name
1	C2E	1	Ligand/Ion	9,9'-[(2R,3R,3AS,5S,7AR,9R,10R,10AS,12S,14AR)-3,5,10,12-TETRAHYDROXY-5,12-DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D:3',2'-J][1,3,7,9,2,8]TETRAOXADIPHOSPHACYCLODODECINE-2,9-DIYL]BIS(2-AMINO-1,9-DIHYDRO-6H-PURIN-6-ONE)

Sites (1, 1)

Asymmetric Unit (1, 1)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLN A:463 , PHE A:479 , LEU A:480 , ARG A:481 , SER A:490 , PRO A:491 , ASN A:492 , MET A:495 , ASP A:508 , ARG A:534 , ARG A:550 , GLU A:551 , ALA A:554 , GLU A:653 , PHE A:654 , GLN A:673 , GLY A:674 , ASP A:675 , THR A:680 , HOH A:804 , HOH A:807 , HOH A:820 , HOH A:822 , HOH A:854 , HOH A:878 , HOH A:906 , HOH A:955 , HOH A:974 , HOH A:1000 , HOH A:1013 , HOH A:1073	BINDING SITE FOR RESIDUE C2E A 701

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

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Chain A from PDB  Type:PROTEIN  Length:253
                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhh..eeeeeee.ee.....eeeeeeeeee..eee....hhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh....eeeee.hhhhh.hhhhhhhhhhhhhhhh.hhh.eeeeeehhhhhhhhhhhhhhhhhhhh...eeeeeee..hhhhhhhhhhh...eeeehhhhhh....hhhhhhhhhhhhhhhhhhh.eeee....hhhhhhhhhhh...ee................. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4foj A 435 DRAEEERIERWVEQLREALVGDGFLLHYQPVLNLQPLELYQAFLRLERNGEMMSPNAFMAIAEEHDLVTEIDRWVVARAIRQLGERQRAGHKTHLLVRIGPNSFSDPQMIDTIREQLAVYGVPGERLWLQTPESKVFTHLRNAQQFLAAVSAMDCKVGLEQFGSGLDSFQLLAHFHPAFLKLDRGITGDIASARDSQEKIREITSRAQPAGILTMAEFVADAQSMSSFFSAGVDYVQGDFVAPTGPLMNYEFG 689
                                   444       454       464    || 476       486       496       506       516       526       536       546       556       566       576       586       596       606       616       626       636       646       656       666       676       686   
                                                            469|                                                                                                                                                                                                                         
                                                             472

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

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Gene Ontology (3, 3)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File

3cnr	XANTHOMONAS AXONOPODIS PV CITRI PILZ (XAC1133)
4fok	1.8 A CRYSTAL STRUCTURE OF THE FIMX EAL DOMAIN IN COMPLEX WITH C-DIGMP
4fou	2.1 A CRYSTAL STRUCTURE OF PILZ-FIMX(EAL DOMAIN) IN COMPLEX WITH C-DIGMP

Description