4FK7 - JenaLib

Title :   CRYSTAL STRUCTURE OF CERTHRAX CATALYTIC DOMAIN

Authors :   B. S. Hong, S. Dimov, W. Tempel, C. Bountra, C. H. Arrowsmith, A. M. Edwar H. Park, Structural Genomics Consortium (Sgc)

Date :   12 Jun 12 (Deposition) - 26 Sep 12 (Release) - 26 Dec 12 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.78

Chains :   Asym./Biol. Unit : A

Keywords :   Mono-Adp-Ribosyltransferase, Transferase, Transferase-Transferase Inhibitor Complex, Structural Genomics Consortium, Sgc, Transferase- Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. Visschedyk, A. Rochon, W. Tempel, S. Dimov, H. W. Park, A. R. Merrill
Certhrax Toxin, An Anthrax-Related Adp-Ribosyltransferase From Bacillus Cereus.
J. Biol. Chem. V. 287 41089 2012
PubMed-ID: 22992735 | Reference-DOI: 10.1074/JBC.M112.412809

Compounds

Molecule 1 - PUTATIVE ADP-RIBOSYLTRANSFERASE CERTHRAX
	Chains	:	A
	EC Number	:	2.4.2.-
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET28-MHL
	Expression System Strain	:	BL21(DE3)
	Expression System Taxid	:	469008
	Gene	:	BCE_G9241_PBC218_0027
	Organism Scientific	:	BACILLUS CEREUS
	Organism Taxid	:	1396
	Synonym	:	TOXIN CERTHRAX

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 14)

Asymmetric/Biological Unit (3, 14)

No.	Name	Count	Type	Full Name
1	CL	1	Ligand/Ion	CHLORIDE ION
2	P34	1	Ligand/Ion	N~2~,N~2~-DIMETHYL-N~1~-(6-OXO-5,6-DIHYDROPHENANTHRIDIN-2-YL)GLYCINAMIDE
3	UNX	12	Ligand/Ion	UNKNOWN ATOM OR ION

Sites (2, 2)

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	ARG A:341 , ARG A:342 , SER A:387 , THR A:388 , SER A:389 , TYR A:398 , GLU A:431 , HOH A:1139	BINDING SITE FOR RESIDUE P34 A 1001
2	AC2	SOFTWARE	ARG A:358 , GLY A:361 , LYS A:458	BINDING SITE FOR RESIDUE CL A 1002

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:204
                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh...hhhhhhhhh.hhhhhhhhhhhhhhhhhh......eeeeeeehhhhhhhhhh....ee..eehhhhhhhhhhhhh..eeee...eeee.....hhhhh.....eeeeeee.....eee.hhhh.hhhh.eeee...eeeeeeeeeee.....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4fk7 A 242 NVLDFKWYTRKAESWGVQTFKNWKENLTISEKDIITGYTGSKYDPINEYLRKKALEKIENQIKNLDAALQKSKITENLIVYRRVSELQFGKKYEDYNLRQNGIINEEKVMELESNFKGQTFIQHNYMSTSLVQDPHQSYSNDRYPILLEITIPEGVHGAYIADMSEYPGQYEMLINRGYTFKYDKFSIVKPGKEYLKVNLSIYL 469
                                   251       261       271       281       291 ||    319       329       339       349       359       369       379       389       399       409       419       429       439       449||     465    
                                                                             293|                                                                                                                                       450|            
                                                                              312                                                                                                                                        457

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (9, 9)

Visualization

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	Ligands, Modified Residues, Ions
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	Sites
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	Cis Peptide Bonds
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Description