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(-) Description

Title :  X-RAY CRYSTAL STRUCTURE OF CORYNEBACTERIUM GLUTAMICUM NRDH-REDOXIN AT 1.5A
 
Authors :  J. Messens, V. T. Dufe, W. Khadija
Date :  11 Jun 12  (Deposition) - 06 Feb 13  (Release) - 03 Apr 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Thioredoxin Fold, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Van Laer, A. M. Dziewulska, M. Fislage, K. Wahni, A. Hbeddou, J. F. Collet, W. Versees, L. M. Mateos, V. Tamu Dufe, J. Messens
Nrdh-Redoxin Of Mycobacterium Tuberculosis And Corynebacterium Glutamicum Dimerizes At High Protein Concentration And Exclusively Receives Electrons From Thioredoxin Reductase.
J. Biol. Chem. V. 288 7942 2013
PubMed-ID: 23362277  |  Reference-DOI: 10.1074/JBC.M112.392688

(-) Compounds

Molecule 1 - PUTATIVE GLUTAREDOXIN NRDH
    Chains: A
    EC Number: 1.20.4.3
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: NRDH
    Organism Scientific: CORYNEBACTERIUM GLUTAMICUM
    Organism Taxid: 1718

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2SO41Ligand/IonSULFATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:48 , LEU A:49 , GLN A:50 , SER A:62 , HOH A:255 , HOH A:261BINDING SITE FOR RESIDUE SO4 A 101
2AC2SOFTWARELYS A:8 , ALA A:10 , CYS A:11 , VAL A:12 , GLN A:13 , LEU A:49BINDING SITE FOR RESIDUE GOL A 102
3AC3SOFTWARETYR A:6 , ARG A:23 , TYR A:42BINDING SITE FOR RESIDUE GOL A 103

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:11 -A:14

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Ala A:51 -Pro A:52

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:76
                                                                                                           
               SCOP domains d4fiwa_ A: Glutaredoxin-like NRDH-redoxin                                    SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee...hhhhhhhhhhhhhh....eeee...hhhhhhhhhhh......eeee..eeee..hhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------- Transcript
                  4fiw A  2 AITVYTKPACVQCNATKKALDRAGLEYDLVDISLDEEAREYVLALGYLQAPVVVADGSHWSGFRPERIREMATAAA 77
                                    11        21        31        41        51        61        71
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4FIW)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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