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(-) Description

Title :  CRYSTAL STRUCTURE OF MCCF-LIKE PROTEIN FROM STREPTOCOCCUS PNEUMONIAE IN COMPLEX WITH AMP
 
Authors :  B. Nocek, W. F. Anderson, A. Joachimiak, Center For Structural Geno Infectious Diseases (Csgid)
Date :  01 May 12  (Deposition) - 18 Jul 12  (Release) - 18 Jul 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.58
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (3x)
Keywords :  Mccf Like, Serine Peptidase, Csgid, Structural Genomics, Niaid, National Institute Of Allergy And Infectious Diseases, Center For Structural Genomics Of Infectious Diseases, Serine Peptidase Clan S66, Amp, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Nocek, A. Tikhonov, K. Severinov, W. F. Anderson, A. Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
Crystal Structure Of Mccf-Like Protein From Streptococcus Pneumoniae In Complex With Amp
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - MCCC FAMILY PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector Type: PMCSG7
    Gene: SP_0182
    Organism Scientific: STREPTOCOCCUS PNEUMONIAE
    Organism Taxid: 1313

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 10)

Asymmetric Unit (4, 10)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2AMP1Ligand/IonADENOSINE MONOPHOSPHATE
3MSE7Mod. Amino AcidSELENOMETHIONINE
4SO41Ligand/IonSULFATE ION
Biological Unit 1 (4, 10)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2AMP1Ligand/IonADENOSINE MONOPHOSPHATE
3MSE7Mod. Amino AcidSELENOMETHIONINE
4SO41Ligand/IonSULFATE ION
Biological Unit 2 (4, 30)
No.NameCountTypeFull Name
1ACT3Ligand/IonACETATE ION
2AMP3Ligand/IonADENOSINE MONOPHOSPHATE
3MSE21Mod. Amino AcidSELENOMETHIONINE
4SO43Ligand/IonSULFATE ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:23 , ILE A:78 , GLY A:79 , PHE A:108 , SER A:109 , LEU A:132 , ALA A:133 , GLU A:171 , PHE A:175 , GLU A:252 , MSE A:285 , HIS A:315 , ARG A:319 , HOH A:524 , HOH A:540 , HOH A:673 , HOH A:762 , HOH A:763 , HOH A:764 , HOH A:783BINDING SITE FOR RESIDUE AMP A 401
2AC2SOFTWAREGLY A:80 , ASP A:110 , SER A:212 , ARG A:221 , HOH A:584BINDING SITE FOR RESIDUE ACT A 402
3AC3SOFTWAREASN A:219BINDING SITE FOR RESIDUE SO4 A 403

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4EYS)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Thr A:317 -Pro A:318

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:343
                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee....hhhhhhhhhhhhhhhhhhhhhh..eeee......hhhhhhhhhhhhhhhhhhhhhh....eeee.....hhhhhhhhhhh.hhhhhhh...eeee..hhhhhhhhhhhh....ee...............hhhhhhhhhhhhhhh...ee....eee......hhhhh.....eee....eeee...eeeeeeeeeehhhhhhhhh.....hhhhhhhhh....hhhhhh..eeeee......hhhhhhhhhhhhhhhhhhhh..eeeee.hhhhhhhhhhhhhhhhhh.....eeeee..........ee...eeeee....eeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4eys A   1 mVSTIGIVSLSSGIIGEDFVKHEVDLGIQRLKDLGLNPIFLPHSLKGLDFIKDHPEARAEDLIHAFSDDSIDmILCAIGGDDTYRLLPYLFENDQLQKVIKQKIFLGFSDTTmNHLmLHKLGIKTFYGQSFLADICELDKEmLAYSLHYFKELIETGRISEIRPSDVWYEERTDFSPTALGTPRVSHTNTGFDLLQGSAQFEGKILGGCLESLYDIFDNSRYADSTELCQKYKLFPDLSDWEGKILLLETSEEKPKPEDFKKmLLTLKDTGIFAVINGLLVGKPmDETFHDDYKEALLDIIDSNIPIVYNLNVGHATPRAIVPFGVHAHVDAQEQVILFDYNK 343
                            |       10        20        30        40        50        60        70  |     80        90       100       110  |   |120       130       140 |     150       160       170       180       190       200       210       220       230       240       250       260  |    270       280    |  290       300       310       320       330       340   
                            |                                                                      73-MSE                                 113-MSE                      142-MSE                                                                                                                  263-MSE               285-MSE                                                      
                            1-MSE                                                                                                             117-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4EYS)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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        A0A0H2UN46_S | A0A0H2UN46: 4e94

(-) Related Entries Specified in the PDB File

4e94 RELATED ID: CSGID-IDP91761 RELATED DB: TARGETTRACK