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(-) Description

Title :  CRYSTAL STRUCTURE OF THE ALNUMYCIN P PHOSPHATASE ALNB
 
Authors :  T. Oja, L. Niiranen, T. Sandalova, K. D. Klika, J. Niemi, P. Mantsala, G. Schneider, M. Metsa-Ketela
Date :  30 Apr 12  (Deposition) - 16 Jan 13  (Release) - 13 Feb 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.25
Chains :  Asym./Biol. Unit :  A
Keywords :  Modified Rossman Fold, Phosphatase, Magnesium Binding, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Oja, L. Niiranen, T. Sandalova, K. D. Klika, J. Niemi, P. Mantsala, G. Schneider, M. Metsa-Ketela
Structural Basis For C-Ribosylation In The Alnumycin A Biosynthetic Pathway.
Proc. Natl. Acad. Sci. Usa V. 110 1291 2013
PubMed-ID: 23297194  |  Reference-DOI: 10.1073/PNAS.1207407110

(-) Compounds

Molecule 1 - ALNB
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PBADDELHISB
    Expression System Strain: TOP10
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: ALNB
    Organism Scientific: STREPTOMYCES SP. CM020
    Organism Taxid: 569580
    Strain: SP. CM020

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1BO31Ligand/IonBORIC ACID
2MG1Ligand/IonMAGNESIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:15 , ASP A:17 , ASP A:175 , HOH A:409 , HOH A:688 , HOH A:739BINDING SITE FOR RESIDUE MG A 301
2AC2SOFTWAREALA A:32 , ALA A:41 , VAL A:42 , ILE A:47 , VAL A:146 , GLU A:147 , ARG A:148 , ASP A:154 , HOH A:412BINDING SITE FOR RESIDUE BO3 A 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4EX6)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Lys A:150 -Pro A:151

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4EX6)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4EX6)

(-) Exons   (0, 0)

(no "Exon" information available for 4EX6)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:219
                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeee........hhhhhhhhhhhhhhhh....hhhhhhhhh..hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.eeeeee...hhhhhhhhhhhhhhhhh..eee...........hhhhhhhhhhhh.hhh.eeeee.hhhhhhhhhhh..eeeee.....hhhhhhhh...eee.hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ex6 A   7 AADRGVILDLDGTLADTPAAIATITAEVLAAMGTAVSRGAILSTVGRPLPASLAGLLGVPVEDPRVAEATEEYGRRFGAHVRAAGPRLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLTVIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGMTVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAVLDG 225
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4EX6)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4EX6)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4EX6)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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UniProtKB/TrEMBL
        B6SEG4_9ACTN | B6SEG4: 4ex7

(-) Related Entries Specified in the PDB File

4ex7 4ex8 4ex9