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(-) Description

Title :  MOLECULAR AND STRUCTURAL CHARACTERIZATION OF THE SH3 DOMAIN OF AHI-1 IN REGULATION OF CELLULAR RESISTANCE OF BCR-ABL+ CHRONIC MYELOID LEUKEMIA CELLS TO TYROSINE KINASE INHIBITORS
 
Authors :  X. F. Van Petegem, P. X. Liu, P. Lobo, X. Jiang
Date :  23 Apr 12  (Deposition) - 06 Jun 12  (Release) - 14 Nov 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.53
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Ahi-1, Ahi1, Ahi-1 Sh3 Domain, Sh3 Domain, Dynamin-2, Protein Binding, Chronic Myeloid Leukemia (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Liu, M. Chen, P. Lobo, J. An, S. W. Grace Cheng, A. Moradian, G. B. Morin, F. Van Petegem, X. Jiang
Molecular And Structural Characterization Of The Sh3 Domain Of Ahi-1 In Regulation Of Cellular Resistance Of Bcr-Abl(+) Chronic Myeloid Leukemia Cells To Tyrosine Kinase Inhibitors.
Proteomics V. 12 2094 2012
PubMed-ID: 22623184  |  Reference-DOI: 10.1002/PMIC.201100553

(-) Compounds

Molecule 1 - JOUBERIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: AHI-1 SH3 DOMAIN (UNP RESIDUES 1048-1116)
    Gene: AHI1
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: ABELSON HELPER INTEGRATION SITE 1 PROTEIN HOMOLOG, AHI-1

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric Unit (1, 3)
No.NameCountTypeFull Name
1PEG3Ligand/IonDI(HYDROXYETHYL)ETHER
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1PEG-1Ligand/IonDI(HYDROXYETHYL)ETHER
Biological Unit 2 (1, 3)
No.NameCountTypeFull Name
1PEG3Ligand/IonDI(HYDROXYETHYL)ETHER

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:1104 , HIS A:1105 , HOH A:1258 , HOH A:1281 , HOH A:1294 , TYR B:1060 , ASN B:1104 , HIS B:1105 , PEG B:1202 , PEG B:1203 , HOH B:1337BINDING SITE FOR RESIDUE PEG B 1201
2AC2SOFTWAREHOH A:1258 , HIS B:1105 , GLU B:1114 , PEG B:1201 , HOH B:1318 , HOH B:1341 , HOH B:1366BINDING SITE FOR RESIDUE PEG B 1202
3AC3SOFTWAREASN A:1104 , HOH A:1238 , HOH A:1243 , HOH A:1284 , LEU B:1059 , TYR B:1060 , LEU B:1111 , PEG B:1201 , HOH B:1365BINDING SITE FOR RESIDUE PEG B 1203

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:65
                                                                                                  
               SCOP domains d4esra_ A: automated matches                                      SCOP domains
               CATH domains ----------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..................eeeeeee....eeeeeee..eeeeee...eeehhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------- Transcript
                4esr A 1052 TAPTVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASETLYQELP 1116
                                  1061      1071      1081      1091      1101      1111     


Chain B from PDB  Type:PROTEIN  Length:64
                                                                                                 
               SCOP domains d4esrb_ B: automated matches                                     SCOP domains
               CATH domains ---------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee..................eeeeeee....eeeeeee..eeeeee...eeehhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------- Transcript
                4esr B 1053 APTVVALYDYTANRSDELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASETLYQELP 1116
                                  1062      1072      1082      1092      1102      1112
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 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (37, 37)

Asymmetric Unit(hide GO term definitions)

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