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(-) Description

Title :  CRYSTAL STRUCTURE OF KIF1A CC1-FHA TANDEM
 
Authors :  J. Yu, L. Huo, Y. Yue, T. Xu, M. Zhang, W. Feng
Date :  02 Apr 12  (Deposition) - 03 Oct 12  (Release) - 03 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.51
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Fha Domain, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. Huo, Y. Yue, J. Ren, J. Yu, J. Liu, Y. Yu, F. Ye, T. Xu, M. Zhang, W. Feng
The Cc1-Fha Tandem As A Central Hub For Controlling The Dimerization And Activation Of Kinesin-3 Kif1A
Structure V. 20 1550 2012
PubMed-ID: 22863567  |  Reference-DOI: 10.1016/J.STR.2012.07.002

(-) Compounds

Molecule 1 - KINESIN-LIKE PROTEIN KIF1A
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET32A
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: CC1-FHA TANDEM, UNP RESIDUES 430-607
    Gene: KIF1A, ATSV, C2ORF20
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: AXONAL TRANSPORTER OF SYNAPTIC VESICLES, MICROTUBULE-BASED MOTOR KIF1A, UNC-104- AND KIF1A-RELATED PROTEIN, HUNC-104

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

Asymmetric Unit (2, 4)
No.NameCountTypeFull Name
1GOL2Ligand/IonGLYCEROL
2PEG2Ligand/IonDI(HYDROXYETHYL)ETHER
Biological Unit 1 (2, 2)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2PEG1Ligand/IonDI(HYDROXYETHYL)ETHER
Biological Unit 2 (2, 2)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL
2PEG1Ligand/IonDI(HYDROXYETHYL)ETHER

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:438 , GLU A:441 , LYS A:442 , ALA A:445BINDING SITE FOR RESIDUE PEG A 701
2AC2SOFTWAREALA A:445 , ASN A:448 , GLU A:449 , GLU A:452BINDING SITE FOR RESIDUE GOL A 702
3AC3SOFTWAREARG A:583 , GLU C:435 , LYS C:438BINDING SITE FOR RESIDUE PEG C 701
4AC4SOFTWAREARG A:436 , ARG D:436 , GLU D:439 , HOH D:812BINDING SITE FOR RESIDUE GOL D 701

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4EGX)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4EGX)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4EGX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4EGX)

(-) Exons   (0, 0)

(no "Exon" information available for 4EGX)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:180
                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeee...eeeee.......eeee...........eee...eeeeee.........ee........eeeeeeee.......eeeeee.....eee..ee....ee.....eeee...eeeeeehhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4egx A 424 GPGSEFSEEAIERLKETEKIIAELNETWEEKLRRTEAIRMEREALLAEMGVAMREDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQE 603
                                   433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603


Chain B from PDB  Type:PROTEIN  Length:180
                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............ee.......eeee...........eee...eeeeee.........ee........eeeeeeee.......eeeeee.....eee..ee....ee.....eeee...eeeeeehhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4egx B 426 GSEFSEEAIERLKETEKIIAELNETWEEKLRRTEAIRMEREALLAEMGVAMREDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGREDGERRQDIVLSGHFIKEEHCVFRSDSRGGSEAVVTLEPCEGADTYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQERE 605
                                   435       445       455       465       475       485       495       505       515       525       535       545       555       565       575       585       595       605


Chain C from PDB  Type:PROTEIN  Length:174
                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eee.....eeee.......eeee...........eee...eeeeeee.....eee.........eeeeee.....eeeeee.....eee..ee....ee.....eeee.....eeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4egx C 424 GPGSEFSEEAIERLKETEKIIAELNETWEEKLRRTEAIRMEREALLAEMGVAMREDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGREDRQDIVLSGHFIKEEHCVFRSDSRSEAVVTLEPCEGADTYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQ 602
                                   433       443       453       463       473       483       493       503       513       526       536       546 ||    558       568       578       588       598    
                                                                                                                            522|                   548|                                                   
                                                                                                                             526                    551                                                   


Chain D from PDB  Type:PROTEIN  Length:173
                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eee.....eeee.......eeee...........eee...eeeeee....ee..........eeeeee.....eeeeee.....eee..eee...ee.....eeee...eeeeeehhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4egx D 425 PGSEFSEEAIERLKETEKIIAELNETWEEKLRRTEAIRMEREALLAEMGVAMREDGGTLGVFSPKKTPHLVNLNEDPLMSECLLYYIKDGITRVGRRQDIVLSGHFIKEEHCVFRSDSRSEAVVTLEPCEGADTYVNGKKVTEPSILRSGNRIIMGKSHVFRFNHPEQARQER 604
                                   434       444       454       464       474       484       494       504       514     ||529       539       551       561       571       581       591       601   
                                                                                                                         520|                   548|                                                     
                                                                                                                          526                    551
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4EGX)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4EGX)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4EGX)

(-) Gene Ontology  (13, 13)

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  4egx
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  KIF1A_HUMAN | Q12756
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        KIF1A_HUMAN | Q12756: 4ejq 4uxo 4uxp 4uxr 4uxs

(-) Related Entries Specified in the PDB File

4ejq