4E4V - JenaLib

Asymmetric Unit (Jmol Viewer)

Asym. Unit - sites (Jmol Viewer)

Biological Unit 1 (Jmol Viewer)

Biol. Unit 1 - sites (Jmol Viewer)

Biological Unit 2 (Jmol Viewer)

Title :   THE CRYSTAL STRUCTURE OF THE DIMERIC HUMAN IMPORTIN ALPHA 1 AT 2.5 ANGSTROM RESOLUTION.

Authors :   P. C. Hang, Z. M. Miknis, W. A. Franke, T. C. Umland, L. W. Schultz

Date :   13 Mar 12 (Deposition) - 29 May 13 (Release) - 29 May 13 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.53

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Armadillo Repeat, Karyopherin, Importin, Nuclear Import, Host-Virus Interaction, Nucleus, Phosphoprotein, Protein Transport, Transport, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   P. C. Hang, Z. J. Miknis, W. A. Franke, T. C. Umland, L. W. Schultz
The Crystal Structure Of The Dimeric Human Importin Alpha 1 At 2. 5 Angstrom Resolution.
To Be Published
PubMed: search

Molecule 1 - IMPORTIN SUBUNIT ALPHA-2
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET15B
	Expression System Strain	:	BL21
	Expression System Taxid	:	511693
	Expression System Vector Type	:	PLASMID
	Fragment	:	IMPORTIN ALPHA 1 LACKING IBB DOMAIN (UNP RESIDUES 70-529)
	Gene	:	IP0A1, KPNA2, RCH1, SRP1
	Mutation	:	YES
	Organism Common	:	HUMAN
	Organism Scientific	:	HOMO SAPIENS
	Organism Taxid	:	9606
	Synonym	:	KARYOPHERIN SUBUNIT ALPHA-2, RAG COHORT PROTEIN 1, SRP1- ALPHA

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (2, 15)

No.	Name	Count	Type	Full Name
1	DTT	2	Ligand/Ion	2,3-DIHYDROXY-1,4-DITHIOBUTANE
2	GOL	13	Ligand/Ion	GLYCEROL

Biological Unit 1 (2, 9)

No.	Name	Count	Type	Full Name
1	DTT	1	Ligand/Ion	2,3-DIHYDROXY-1,4-DITHIOBUTANE
2	GOL	8	Ligand/Ion	GLYCEROL

Biological Unit 2 (2, 6)

No.	Name	Count	Type	Full Name
1	DTT	1	Ligand/Ion	2,3-DIHYDROXY-1,4-DITHIOBUTANE
2	GOL	5	Ligand/Ion	GLYCEROL

Asymmetric Unit (15, 15)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ARG A:101 , LYS A:102 , SER A:105 , TRP B:399 , ASP B:442	BINDING SITE FOR RESIDUE GOL A 601
02	AC2	SOFTWARE	ILE A:116 , HIS B:376 , HOH B:724 , HOH B:763	BINDING SITE FOR RESIDUE GOL A 602
03	AC3	SOFTWARE	PRO A:174 , HIS A:175 , ALA A:176 , HIS A:177 , GLU B:480	BINDING SITE FOR RESIDUE GOL A 603
04	AC4	SOFTWARE	ASP A:217 , MET A:218 , ARG A:258 , HIS A:262	BINDING SITE FOR RESIDUE GOL A 604
05	AC5	SOFTWARE	GLN A:372 , HIS A:376	BINDING SITE FOR RESIDUE GOL A 605
06	AC6	SOFTWARE	VAL A:374 , GLY A:377 , GOL A:608	BINDING SITE FOR RESIDUE GOL A 606
07	AC7	SOFTWARE	THR A:131 , GLN A:137 , SER A:169 , HOH A:714 , HOH A:752	BINDING SITE FOR RESIDUE GOL A 607
08	AC8	SOFTWARE	GLN A:371 , VAL A:374 , GLU A:411 , GLN A:412 , TYR A:415 , GOL A:606	BINDING SITE FOR RESIDUE GOL A 608
09	AC9	SOFTWARE	LEU A:454 , GLU A:456 , LYS A:459	BINDING SITE FOR RESIDUE DTT A 609
10	BC1	SOFTWARE	ALA A:431 , LYS A:432 , CYS B:223 , GLY B:224	BINDING SITE FOR RESIDUE GOL B 601
11	BC2	SOFTWARE	GLN B:371 , GLU B:411 , GLN B:412	BINDING SITE FOR RESIDUE GOL B 602
12	BC3	SOFTWARE	LYS B:353 , GLU B:354 , GLU B:396	BINDING SITE FOR RESIDUE GOL B 603
13	BC4	SOFTWARE	HOH A:753 , ALA B:431 , LYS B:432 , ASP B:433 , HOH B:722 , HOH B:745	BINDING SITE FOR RESIDUE GOL B 604
14	BC5	SOFTWARE	ASN B:228	BINDING SITE FOR RESIDUE GOL B 605
15	BC6	SOFTWARE	HIS B:418 , GLU B:456 , HOH B:712	BINDING SITE FOR RESIDUE DTT B 606

(no "SS Bond" information available for 4E4V)

Asymmetric Unit

No.	Residues
1	Asn A:241	-	Pro A:242
2	Asn B:241	-	Pro B:242

Asymmetric Unit (5, 10)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_067625	A	157	V	IMA1_HUMAN	Polymorphism	17850032	A/B	A	157	V
2	UniProt	VAR_013137	P	165	R	IMA1_HUMAN	Polymorphism	11545989	A/B	P	165	R
3	UniProt	VAR_067626	G	365	S	IMA1_HUMAN	Polymorphism	1059558	A/B	G	365	S
4	UniProt	VAR_014453	T	430	P	IMA1_HUMAN	Polymorphism	1059538	A/B	T	430	P
5	UniProt	VAR_067627	K	453	N	IMA1_HUMAN	Polymorphism	17850031	A/B	K	453	N

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (5, 5)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_067625	A	157	V	IMA1_HUMAN	Polymorphism	17850032	A	A	157	V
2	UniProt	VAR_013137	P	165	R	IMA1_HUMAN	Polymorphism	11545989	A	P	165	R
3	UniProt	VAR_067626	G	365	S	IMA1_HUMAN	Polymorphism	1059558	A	G	365	S
4	UniProt	VAR_014453	T	430	P	IMA1_HUMAN	Polymorphism	1059538	A	T	430	P
5	UniProt	VAR_067627	K	453	N	IMA1_HUMAN	Polymorphism	17850031	A	K	453	N

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (5, 5)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
1	UniProt	VAR_067625	A	157	V	IMA1_HUMAN	Polymorphism	17850032	B	A	157	V
2	UniProt	VAR_013137	P	165	R	IMA1_HUMAN	Polymorphism	11545989	B	P	165	R
3	UniProt	VAR_067626	G	365	S	IMA1_HUMAN	Polymorphism	1059558	B	G	365	S
4	UniProt	VAR_014453	T	430	P	IMA1_HUMAN	Polymorphism	1059538	B	T	430	P
5	UniProt	VAR_067627	K	453	N	IMA1_HUMAN	Polymorphism	17850031	B	K	453	N

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

(no "PROSITE Motif" information available for 4E4V)

Asymmetric Unit (8, 16)

	ENSEMBL					UniProtKB			PDB
No.	Transcript ID	Exon	Exon ID	Genome Location	Length	ID	Location	Length	Count	Location	Length
1.1	ENST00000330459	1	ENSE00001673356	chr17:66031848-66031956	109	IMA1_HUMAN	-	0	0	-	-
1.2	ENST00000330459	2	ENSE00002150216	chr17:66033226-66033323	98	IMA1_HUMAN	1-25	25	0	-	-
1.3	ENST00000330459	3	ENSE00001697155	chr17:66033474-66033611	138	IMA1_HUMAN	26-71	46	2	A:65-71 (gaps) B:65-71 (gaps)	25 25
1.4	ENST00000330459	4	ENSE00001771132	chr17:66036794-66036882	89	IMA1_HUMAN	72-101	30	2	A:72-101 B:72-101	30 30
1.5	ENST00000330459	5	ENSE00001684697	chr17:66038201-66038469	269	IMA1_HUMAN	101-191	91	2	A:101-191 B:101-191	91 91
1.6	ENST00000330459	6	ENSE00001643282	chr17:66039021-66039115	95	IMA1_HUMAN	191-222	32	2	A:191-222 B:191-222	32 32
1.7	ENST00000330459	7	ENSE00001723038	chr17:66039216-66039479	264	IMA1_HUMAN	223-310	88	2	A:223-310 B:223-310	88 88
1.8	ENST00000330459	8	ENSE00001716874	chr17:66039954-66040187	234	IMA1_HUMAN	311-388	78	2	A:311-388 B:311-388	78 78
1.9	ENST00000330459	9	ENSE00001712528	chr17:66040437-66040619	183	IMA1_HUMAN	389-449	61	2	A:389-449 B:389-449	61 61
1.10	ENST00000330459	10	ENSE00001781256	chr17:66041888-66042037	150	IMA1_HUMAN	450-499	50	2	A:450-497 B:450-497	48 48
1.11	ENST00000330459	11	ENSE00001735149	chr17:66042620-66042969	350	IMA1_HUMAN	500-529	30	0	-	-

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:433
 aligned with IMA1_HUMAN | P52292 from UniProtKB/Swiss-Prot  Length:529

    Alignment length:451
                                    56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496 
           IMA1_HUMAN    47 MLKRRNVSSFPDDATSPLQENRNNQGTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFS 497
               SCOP domains d4                  e4va_ A: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..------------------..........hhhhhhhhhh..hhhhhhhhhhhhhhhhh.....hhhhhhhh.hhhhhhhhh....hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhh....hhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..hhhhhhhhhh..hhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------V-------R-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S----------------------------------------------------------------P----------------------N-------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3 UniProt: 26-71  Exon 1.4  PDB: A:72-101       -----------------------------------------------------------------------------------------Exon 1.6  PDB: A:191-222        Exon 1.7  PDB: A:223-310 UniProt: 223-310                                               Exon 1.8  PDB: A:311-388 UniProt: 311-388                                     Exon 1.9  PDB: A:389-449 UniProt: 389-449                    Exon 1.10  PDB: A:450-497 UniProt: 450-499       Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------Exon 1.5  PDB: A:101-191 UniProt: 101-191                                                  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 4e4v A  65 ML------------------DALNQGTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQNHENESVYRASLSLIEKYFS 497
                             |       -         -|       76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496 
                             |                 67                                                                                                                                                                                                                                                                                                                                                                                                                                              
                            66

Chain B from PDB  Type:PROTEIN  Length:433
 aligned with IMA1_HUMAN | P52292 from UniProtKB/Swiss-Prot  Length:529

    Alignment length:451
                                    56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496 
           IMA1_HUMAN    47 MLKRRNVSSFPDDATSPLQENRNNQGTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQNHENESVYKASLSLIEKYFS 497
               SCOP domains d4                  e4vb_ B: automated matches                                                                                                                                                                                                                                                                                                                                                                                                                      SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..------------------..........hhhhhhhhhh..hhhhhhhhhhhhhhhhhh....hhhhhhhh.hhhhhhhhh....hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhh....hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..hhhhhhhhhhh.hhhhhhhhhh..hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh..hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------V-------R-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S----------------------------------------------------------------P----------------------N-------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.3 UniProt: 26-71  Exon 1.4  PDB: B:72-101       -----------------------------------------------------------------------------------------Exon 1.6  PDB: B:191-222        Exon 1.7  PDB: B:223-310 UniProt: 223-310                                               Exon 1.8  PDB: B:311-388 UniProt: 311-388                                     Exon 1.9  PDB: B:389-449 UniProt: 389-449                    Exon 1.10  PDB: B:450-497 UniProt: 450-499       Transcript 1 (1)
           Transcript 1 (2) ------------------------------------------------------Exon 1.5  PDB: B:101-191 UniProt: 101-191                                                  ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript 1 (2)
                 4e4v B  65 ML------------------DALNQGTVNWSVDDIVKGINSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSVFRDLVIKYGAVDPLLALLAVPDMSSLACGYLRNLTWTLSNLCRNKNPAPPIDAVEQILPTLVRLLHHDDPEVLADTCWAISYLTDGPNERIGMVVKTGVVPQLVKLLGASELPIVTPALRAIGNIVTGTDEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVSVLSKADFKTQKEAVWAVTNYTSGGTVEQIVYLVHCGIIEPLMNLLTAKDTKIILVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQNHENESVYRASLSLIEKYFS 497
                             |       -         -|       76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426       436       446       456       466       476       486       496 
                            66                 67

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All alpha proteins (14657)

Fold: alpha-alpha superhelix (690)

Superfamily: ARM repeat (317)

Family: Armadillo repeat (77)

Protein domain: automated matches (16)

Human (Homo sapiens) [TaxId: 9606] (9)

1a	d4e4va_	A:
1b	d4e4vb_	B:

(no "CATH Domain" information available for 4E4V)

(no "Pfam Domain" information available for 4E4V)

Asymmetric Unit(hide GO term definitions)

Chain A,B (IMA1_HUMAN | P52292)

molecular function
	GO:0042826	histone deacetylase binding	Interacting selectively and non-covalently with the enzyme histone deacetylase.
	GO:0008139	nuclear localization sequence binding	Interacting selectively and non-covalently with a nuclear localization sequence, a specific peptide sequence that acts as a signal to localize the protein within the nucleus.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0008565	protein transporter activity	Enables the directed movement of proteins into, out of or within a cell, or between cells.
biological process
	GO:0006259	DNA metabolic process	Any cellular metabolic process involving deoxyribonucleic acid. This is one of the two main types of nucleic acid, consisting of a long, unbranched macromolecule formed from one, or more commonly, two, strands of linked deoxyribonucleotides.
	GO:0006607	NLS-bearing protein import into nucleus	The directed movement of a protein bearing a nuclear localization signal (NLS) from the cytoplasm into the nucleus, across the nuclear membrane.
	GO:0075733	intracellular transport of virus	The directed movement of a virus, or part of a virus, within the host cell.
	GO:0019054	modulation by virus of host process	The process in which a virus effects a change in the processes and activities of its host organism.
	GO:0006606	protein import into nucleus	The directed movement of a protein from the cytoplasm to the nucleus.
	GO:0015031	protein transport	The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
	GO:0000018	regulation of DNA recombination	Any process that modulates the frequency, rate or extent of DNA recombination, a DNA metabolic process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents.
	GO:0006810	transport	The directed movement of substances (such as macromolecules, small molecules, ions) or cellular components (such as complexes and organelles) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter, pore or motor protein.
	GO:0016032	viral process	A multi-organism process in which a virus is a participant. The other participant is the host. Includes infection of a host cell, replication of the viral genome, and assembly of progeny virus particles. In some cases the viral genetic material may integrate into the host genome and only subsequently, under particular circumstances, 'complete' its life cycle.
cellular component
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0005829	cytosol	The part of the cytoplasm that does not contain organelles but which does contain other particulate matter, such as protein complexes.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005643	nuclear pore	Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
	GO:0005654	nucleoplasm	That part of the nuclear content other than the chromosomes or the nucleolus.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Asymmetric Unit
	Complete Structure
		Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
		WebMol \| AstexViewer[tm]@PDBe (Java Applets, require no local installation except for Java; loading may be slow)
		STRAP (Java WebStart application, automatic local installation, requires Java; full application with system access!)
		RasMol (require local installation)
		Molscript (VRML) (requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)

	Ligands, Modified Residues, Ions
		DTT	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]
		GOL	[ RasMol \| Jena3D ]	+environment [ RasMol \| Jena3D ]

	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]
		AC2	[ RasMol ]	+environment [ RasMol ]
		AC3	[ RasMol ]	+environment [ RasMol ]
		AC4	[ RasMol ]	+environment [ RasMol ]
		AC5	[ RasMol ]	+environment [ RasMol ]
		AC6	[ RasMol ]	+environment [ RasMol ]
		AC7	[ RasMol ]	+environment [ RasMol ]
		AC8	[ RasMol ]	+environment [ RasMol ]
		AC9	[ RasMol ]	+environment [ RasMol ]
		BC1	[ RasMol ]	+environment [ RasMol ]
		BC2	[ RasMol ]	+environment [ RasMol ]
		BC3	[ RasMol ]	+environment [ RasMol ]
		BC4	[ RasMol ]	+environment [ RasMol ]
		BC5	[ RasMol ]	+environment [ RasMol ]
		BC6	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Asn A:241 - Pro A:242	[ RasMol ]
		Asn B:241 - Pro B:242	[ RasMol ]

Biological Units
	Complete Structure
		Biological Unit 1	[ Jena3D ]
		Biological Unit 2	[ Jena3D ]

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym. Unit PNG format \| Asym. Unit - sites PNG format \| Biol. Unit 1 PNG format \| Biol. Unit 1 - sites PNG format \| Biol. Unit 2 PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Access by PDB/NDB ID
	4e4v
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	IMA1_HUMAN \| P52292
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/SwissProt

Access by Enzyme Classificator (EC Number)
	(no 'Enzyme Classificator' available)
		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
	(no 'GenAge ID' available)
		Age Related Information	:	GenAge

Access by PDB/NDB ID
		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	IMA1_HUMAN \| P52292
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

UniProtKB/Swiss-Prot
	IMA1_HUMAN \| P52292	:	1efx 1qgk 1qgr 3fex 3fey 3wpt 4wv6

(no "Related Entries Specified in the PDB File" available for 4E4V)

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (2, 15)

Sites (15, 15)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (5, 10)

PROSITE Motifs (0, 0)

Exons (8, 16)

Sequences/Alignments

Classification and Annotation

SCOP Domains (1, 2)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (19, 19)

Visualization

Interactive Views

Still Images

Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File