4CYB - JenaLib

Title :   DPSC FROM STREPTOMYCES COELICOLOR

Authors :   P. D. Townsend, M. D. Hitchings, R. Del Sol, E. Pohl

Date :   10 Apr 14 (Deposition) - 25 Jun 14 (Release) - 26 Nov 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.78

Chains :   Asym./Biol. Unit : A,B,C,D,E,F,G,H,I,J,K,L

Keywords :   Iron Binding Protein, Dps, Ferritin (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   M. D. Hitchings, P. D. Townsend, E. Pohl, P. D. Facey, D. H. Jones, P. J. Dyson, R. Del Sol
A Tale Of Tails: Deciphering The Contribution Of Terminal Tails To The Biochemical Properties Of Two Dps Proteins From Streptomyces Coelicolor
Cell. Mol. Life Sci. V. 71 4911 2014
PubMed-ID: 24915944 | Reference-DOI: 10.1007/S00018-014-1658-4

Compounds

Molecule 1 - PUTATIVE DNA PROTECTION PROTEIN
	Chains	:	A, B, C, D, E, F, G, H, I, J, K, L
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Fragment	:	RESIDUES 28-200
	Organism Scientific	:	STREPTOMYCES COELICOLOR
	Organism Taxid	:	1902
	Synonym	:	DPSC

Structural Features

Chains, Units

		1	2	3	4	5	6	7	8	9	10	11	12
Asymmetric/Biological Unit	:	A	B	C	D	E	F	G	H	I	J	K	L

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (2, 16)

Sites (16, 16)

Asymmetric Unit (16, 16)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASP A:100 , GLU A:104 , HOH A:2076 , HOH A:2077 , HOH A:2084 , HIS B:73	BINDING SITE FOR RESIDUE FE A1200
02	AC2	SOFTWARE	HIS A:73 , HOH A:2044 , HOH A:2047 , ASP B:100 , GLU B:104 , HOH B:2065	BINDING SITE FOR RESIDUE FE B1200
03	AC3	SOFTWARE	ASP C:100 , GLU C:104 , HOH C:2087 , HOH C:2088 , HOH C:2093 , HIS D:73	BINDING SITE FOR RESIDUE FE C1200
04	AC4	SOFTWARE	HOH C:2149 , HOH C:2151 , HOH F:2084 , HOH F:2086 , HOH H:2090 , HOH H:2091	BINDING SITE FOR RESIDUE NA C1300
05	AC5	SOFTWARE	HIS C:73 , HOH C:2046 , HOH C:2053 , ASP D:100 , GLU D:104 , HOH D:2074	BINDING SITE FOR RESIDUE FE D1200
06	AC6	SOFTWARE	ASP E:100 , GLU E:104 , HOH E:2072 , HOH E:2073 , HOH E:2078 , HIS F:73	BINDING SITE FOR RESIDUE FE E1200
07	AC7	SOFTWARE	HIS E:73 , HOH E:2042 , HOH E:2045 , ASP F:100 , GLU F:104 , HOH F:2052	BINDING SITE FOR RESIDUE FE F1200
08	AC8	SOFTWARE	ASP G:100 , GLU G:104 , HOH G:2074 , HOH G:2076 , HOH G:2081 , HIS H:73	BINDING SITE FOR RESIDUE FE G1200
09	AC9	SOFTWARE	HIS G:73 , HOH G:2042 , HOH G:2047 , ASP H:100 , GLU H:104 , HOH H:2062	BINDING SITE FOR RESIDUE FE H1200
10	BC1	SOFTWARE	ASP I:100 , GLU I:104 , HOH I:2091 , HOH I:2092 , HOH I:2098 , HIS J:73	BINDING SITE FOR RESIDUE FE I1200
11	BC2	SOFTWARE	HIS I:73 , HOH I:2060 , HOH I:2065 , ASP J:100 , GLU J:104 , HOH J:2059	BINDING SITE FOR RESIDUE FE J1201
12	BC3	SOFTWARE	HOH G:2057 , HOH G:2058 , HOH G:2059 , HOH J:2111 , HOH J:2112 , HOH J:2113	BINDING SITE FOR RESIDUE NA J1300
13	BC4	SOFTWARE	ASP K:100 , GLU K:104 , HOH K:2075 , HOH K:2076 , HOH K:2082 , HIS L:73	BINDING SITE FOR RESIDUE FE K1200
14	BC5	SOFTWARE	HOH B:2109 , HOH B:2112 , HOH B:2116 , HOH D:2114 , HOH K:2139 , HOH K:2140	BINDING SITE FOR RESIDUE NA K1300
15	BC6	SOFTWARE	HIS K:73 , HOH K:2046 , HOH K:2051 , ASP L:100 , GLU L:104 , HOH L:2056	BINDING SITE FOR RESIDUE FE L1200
16	BC7	SOFTWARE	HOH L:2041 , HOH L:2042 , HOH L:2044 , HOH L:2098 , HOH L:2099 , HOH L:2100	BINDING SITE FOR RESIDUE NA L1300

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:172
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:172
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197  
         Q9K3L0_STRCO    28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh........eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb A  28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197

Chain B from PDB  Type:PROTEIN  Length:172
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:172
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197  
         Q9K3L0_STRCO    28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh........eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb B  28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197

Chain C from PDB  Type:PROTEIN  Length:172
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:172
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197  
         Q9K3L0_STRCO    28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb C  28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197

Chain D from PDB  Type:PROTEIN  Length:171
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:171
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198 
         Q9K3L0_STRCO    29 TIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh........eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb D  29 TIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198

Chain E from PDB  Type:PROTEIN  Length:171
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:171
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198 
         Q9K3L0_STRCO    29 TIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh........eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb E  29 TIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198

Chain F from PDB  Type:PROTEIN  Length:172
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:172
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197  
         Q9K3L0_STRCO    28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb F  28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197

Chain G from PDB  Type:PROTEIN  Length:172
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:172
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197  
         Q9K3L0_STRCO    28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh........eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb G  28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197

Chain H from PDB  Type:PROTEIN  Length:172
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:172
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197  
         Q9K3L0_STRCO    28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh........eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb H  28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197

Chain I from PDB  Type:PROTEIN  Length:172
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:172
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197  
         Q9K3L0_STRCO    28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh........eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb I  28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197

Chain J from PDB  Type:PROTEIN  Length:173
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:173
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197   
         Q9K3L0_STRCO    28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVHA 200
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh........eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb J  28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVHA 200
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197

Chain K from PDB  Type:PROTEIN  Length:171
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:171
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198 
         Q9K3L0_STRCO    29 TIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh........eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb K  29 TIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
                                    38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198

Chain L from PDB  Type:PROTEIN  Length:172
 aligned with Q9K3L0_STRCO | Q9K3L0 from UniProtKB/TrEMBL  Length:200

    Alignment length:172
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197  
         Q9K3L0_STRCO    28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4cyb L  28 RTIQEFGTVKQFPVALTMDTRLYSCQRLNKVLADTRILHDLYKKYHWLMRGATFYQLHLLLDKHAGEQLELIDTVAERVQTLGGVAVGDPRHVAEITTVPRPPDGVEEVPSMLSRLLEAHELILTECHDAAARTQEYGDDGTNDLLVSEVLRTNELQAWFVAEHLVDTPLVH 199
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (7, 7)

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		BC6	[ RasMol ]	+environment [ RasMol ]
		BC7	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
(no "Cis Peptide Bonds" information available for 4cyb)

Still Images

Jmol
	protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick [ Asym./Biol. Unit PNG format \| Asym./Biol. Unit - sites PNG format ](automatic orientation, automatically generated)
Molscript
	protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick [ mono PDF format \| stereo PDF format ](default orientation, automatically generated)

Databases and Analysis Tools

Databases

Access by PDB/NDB ID
	4cyb
		Family and Domain Information	:	ProDom \| SYSTERS
		General Structural Information	:	GlycoscienceDB \| MMDB \| NDB \| OCA \| PDB \| PDBe \| PDBj \| PDBsum \| PDBWiki \| PQS \| PROTEOPEDIA
		Orientation in Membranes	:	OPM
		Protein Surface	:	SURFACE
		Secondary Structure	:	DSSP (structure derived) \| HSSP (homology derived)
		Structural Genomics	:	GeneCensus
		Structural Neighbours	:	CE \| VAST
		Structure Classification	:	CATH \| Dali \| SCOP
		Validation and Original Data	:	BMRB Data View \| BMRB Restraints Grid \| EDS \| PROCHECK \| RECOORD \| WHAT_CHECK

Access by UniProt ID/Accession number
	Q9K3L0_STRCO \| Q9K3L0
		Comparative Protein Structure Models	:	ModBase
		Genomic Information	:	Ensembl
		Protein-protein Interaction	:	DIP
		Sequence, Family and Domain Information	:	InterPro \| Pfam \| SMART \| UniProtKB/TrEMBL

Access by Enzyme Classificator (EC Number)
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		General Enzyme Information	:	BRENDA \| EC-PDB \| Enzyme \| IntEnz
		Pathway	:	KEGG \| MetaCyc

Access by Disease Identifier (MIM ID)
	(no 'MIM ID' available)
		Disease Information	:	OMIM

Access by GenAge ID
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		Age Related Information	:	GenAge

Analysis Tools

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		Domain Information	:	XDom
		Interatomic Contacts of Structural Units	:	CSU
		Ligand-protein Contacts	:	LPC
		Protein Cavities	:	castP
		Sequence and Secondary Structure	:	PDBCartoon
		Structure Alignment	:	STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
		Structure and Sequence Browser	:	STING

Access by UniProt ID/Accession number
	Q9K3L0_STRCO \| Q9K3L0
		Protein Disorder Prediction	:	DisEMBL \| FoldIndex \| GLOBPLOT (for more information see DisProt)

Description