4CUA - JenaLib

Title :   UNRAVELLING THE MULTIPLE FUNCTIONS OF THE ARCHITECTURALLY INTRICATE STREPTOCOCCUS PNEUMONIAE BETA-GALACTOSIDASE, BGAA

Authors :   A. K. Singh, B. Pluvinage, M. A. Higgins, A. B. Dalia, M. Flynn, A. R. Lloy J. N. Weiser, K. A. Stubbs, A. B. Boraston, S. J. King

Date :   17 Mar 14 (Deposition) - 20 Aug 14 (Release) - 24 Sep 14 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.54

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   A. K. Singh, B. Pluvinage, M. A. Higgins, A. B. Dalia, S. A. Woodiga, M. Flynn, A. R. Lloyd, J. N. Weiser, K. A. Stubbs, A. B. Boraston, S. J. King
Unravelling The Multiple Functions Of The Architecturally Intricate Streptococcus Pneumoniae Beta-Galactosidase, Bgaa
Plos Pathog. V. 10 04364 2014
PubMed-ID: 25210925 | Reference-DOI: 10.1371/JOURNAL.PPAT.1004364

Compounds

Molecule 1 - BETA-GALACTOSIDASE
	Chains	:	A, B
	EC Number	:	3.2.1.23
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Plasmid	:	PET28A
	Expression System Taxid	:	562
	Expression System Vector Type	:	PLASMID
	Fragment	:	CARBOHYDRATE-BINDING MODULE, RESIDUES 1463-1645
	Organism Scientific	:	STREPTOCOCCUS PNEUMONIAE
	Organism Taxid	:	1313
	Strain	:	NCH18

Structural Features

Chains, Units

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (3, 17)

Asymmetric Unit (3, 17)

No.	Name	Count	Type	Full Name
1	CA	2	Ligand/Ion	CALCIUM ION
2	EDO	11	Ligand/Ion	1,2-ETHANEDIOL
3	MSE	4	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 1 (2, 8)

No.	Name	Count	Type	Full Name
1	CA	-1	Ligand/Ion	CALCIUM ION
2	EDO	6	Ligand/Ion	1,2-ETHANEDIOL
3	MSE	2	Mod. Amino Acid	SELENOMETHIONINE

Biological Unit 2 (2, 7)

No.	Name	Count	Type	Full Name
1	CA	-1	Ligand/Ion	CALCIUM ION
2	EDO	5	Ligand/Ion	1,2-ETHANEDIOL
3	MSE	2	Mod. Amino Acid	SELENOMETHIONINE

Sites (13, 13)

Asymmetric Unit (13, 13)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	ASN B:1495 , ASP B:1498 , LEU B:1500 , ASN B:1509 , THR B:1636 , GLU B:1637	BINDING SITE FOR RESIDUE CA B2644
02	AC2	SOFTWARE	ASN A:1495 , ASP A:1498 , LEU A:1500 , ASN A:1509 , THR A:1636 , GLU A:1637	BINDING SITE FOR RESIDUE CA A2644
03	AC3	SOFTWARE	ASP A:1491 , ARG A:1510 , THR A:1512 , ASP A:1548 , HOH A:2172 , HOH A:2363	BINDING SITE FOR RESIDUE EDO A2645
04	AC4	SOFTWARE	ASP B:1491 , ARG B:1510 , THR B:1512 , ASP B:1548 , HOH B:2329	BINDING SITE FOR RESIDUE EDO B2645
05	AC5	SOFTWARE	PHE A:1483 , SER A:1485 , SER A:1522 , VAL A:1577 , GLY A:1578 , PHE A:1584 , ASN A:1585 , ARG A:1621	BINDING SITE FOR RESIDUE EDO A2646
06	AC6	SOFTWARE	SER A:1490 , ASP A:1491 , PRO A:1492 , ASN A:1495 , ALA A:1508 , ASN A:1509 , ARG A:1510 , HOH A:2364	BINDING SITE FOR RESIDUE EDO A2647
07	AC7	SOFTWARE	GLN A:1473 , SER A:1477 , GLU A:1478 , PRO A:1480 , HOH A:2110 , HOH A:2119 , HOH A:2121 , HOH A:2365 , HOH A:2366	BINDING SITE FOR RESIDUE EDO A2648
08	AC8	SOFTWARE	THR A:1566 , VAL A:1567 , THR A:1569 , HIS A:1582 , VAL A:1583 , HOH A:2287 , HOH A:2367	BINDING SITE FOR RESIDUE EDO A2649
09	AC9	SOFTWARE	SER B:1490 , ASP B:1491 , PRO B:1492 , ASN B:1495 , ALA B:1508 , ASN B:1509 , ARG B:1510	BINDING SITE FOR RESIDUE EDO B2646
10	BC1	SOFTWARE	SER B:1485 , GLU B:1520 , ALA B:1521 , SER B:1522 , ARG B:1621 , ARG B:1623 , HOH B:2170 , HOH B:2309	BINDING SITE FOR RESIDUE EDO B2647
11	BC2	SOFTWARE	MSE A:1607 , HIS A:1609 , HOH A:2329 , ASN B:1573 , ASN B:1579	BINDING SITE FOR RESIDUE EDO B2648
12	BC3	SOFTWARE	ARG A:1536 , SER A:1537 , HOH A:2209 , HOH A:2368	BINDING SITE FOR RESIDUE EDO A2650
13	BC4	SOFTWARE	SER B:1556 , TYR B:1557 , HOH B:2331	BINDING SITE FOR RESIDUE EDO B2649

SS Bonds (0, 0)

Cis Peptide Bonds (4, 4)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:178
 aligned with Q8DQP4_STRR6 | Q8DQP4 from UniProtKB/TrEMBL  Length:2228

    Alignment length:178
                                  1475      1485      1495      1505      1515      1525      1535      1545      1555      1565      1575      1585      1595      1605      1615      1625      1635        
        Q8DQP4_STRR6   1466 QGANISDQWTGSELPLAFASDSNPSDPVSNVNDKLISYNNQPANRWTNWNRSNPEASVGVLFGDSGILSKRSVDNLSVGFHEDHGVGAPKSYVIEYYVGKTVPTAPKNPSFVGNEDHVFNDSANWKPVTNLKAPAQLKAGEMNHFSFDKVETYAIRIRMVKADNKRGTSITEVQIFAK 1643
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...............eeee.......hhhhhhh............ee.......eeeeeee.ee..ee..eeeeeeeeee..........eeeeeee..........hhhhhhhh.hhhhhhh.eee..............eeeeeeeeeee.eeeeeee........eeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4cua A 1466 QGANISDQWTGSELPLAFASDSNPSDPVSNVNDKLISYNNQPANRWTNWNRSNPEASVGVLFGDSGILSKRSVDNLSVGFHEDHGVGAPKSYVIEYYVGKTVPTAPKNPSFVGNEDHVFNDSANWKPVTNLKAPAQLKAGEmNHFSFDKVETYAIRIRmVKADNKRGTSITEVQIFAK 1643
                                  1475      1485      1495      1505      1515      1525      1535      1545      1555      1565      1575      1585      1595      1605 |    1615      1625      1635        
                                                                                                                                                                      1607-MSE         1624-MSE

Chain B from PDB  Type:PROTEIN  Length:178
 aligned with Q8DQP4_STRR6 | Q8DQP4 from UniProtKB/TrEMBL  Length:2228

    Alignment length:178
                                  1475      1485      1495      1505      1515      1525      1535      1545      1555      1565      1575      1585      1595      1605      1615      1625      1635        
        Q8DQP4_STRR6   1466 QGANISDQWTGSELPLAFASDSNPSDPVSNVNDKLISYNNQPANRWTNWNRSNPEASVGVLFGDSGILSKRSVDNLSVGFHEDHGVGAPKSYVIEYYVGKTVPTAPKNPSFVGNEDHVFNDSANWKPVTNLKAPAQLKAGEMNHFSFDKVETYAIRIRMVKADNKRGTSITEVQIFAK 1643
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..ee...........eeee.......hhhhhhh............ee.......eeeeeee.ee..ee..eeeeeeeeee.....ee.eeeeeeeee..........hhhhhhhh.hhhhhhh.eee..............eeeeeeeeeee.eeeeeeee.....eeeeeeee.ee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4cua B 1466 QGANISDQWTGSELPLAFASDSNPSDPVSNVNDKLISYNNQPANRWTNWNRSNPEASVGVLFGDSGILSKRSVDNLSVGFHEDHGVGAPKSYVIEYYVGKTVPTAPKNPSFVGNEDHVFNDSANWKPVTNLKAPAQLKAGEmNHFSFDKVETYAIRIRmVKADNKRGTSITEVQIFAK 1643
                                  1475      1485      1495      1505      1515      1525      1535      1545      1555      1565      1575      1585      1595      1605 |    1615      1625      1635        
                                                                                                                                                                      1607-MSE         1624-MSE

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (11, 11)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File

4cu6	UNRAVELLING THE MULTIPLE FUNCTIONS OF THE ARCHITECTURALLY INTRICATE STREPTOCOCCUS PNEUMONIAE BETA-GALACTOSIDASE, BGAA
4cu7	UNRAVELLING THE MULTIPLE FUNCTIONS OF THE ARCHITECTURALLY INTRICATE STREPTOCOCCUS PNEUMONIAE BETA-GALACTOSIDASE, BGAA
4cu8	UNRAVELLING THE MULTIPLE FUNCTIONS OF THE ARCHITECTURALLY INTRICATE STREPTOCOCCUS PNEUMONIAE BETA-GALACTOSIDASE, BGAA
4cu9	UNRAVELLING THE MULTIPLE FUNCTIONS OF THE ARCHITECTURALLY INTRICATE STREPTOCOCCUS PNEUMONIAE BETA-GALACTOSIDASE, BGAA
4cub	UNRAVELLING THE MULTIPLE FUNCTIONS OF THE ARCHITECTURALLY INTRICATE STREPTOCOCCUS PNEUMONIAE BETA-GALACTOSIDASE, BGAA
4cuc	UNRAVELLING THE MULTIPLE FUNCTIONS OF THE ARCHITECTURALLY INTRICATE STREPTOCOCCUS PNEUMONIAE BETA-GALACTOSIDASE, BGAA.

Description