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(-) Description

Title :  39S LARGE SUBUNIT OF THE PORCINE MITOCHONDRIAL RIBOSOME
 
Authors :  B. J. Greber, D. Boehringer, A. Leitner, P. Bieri, F. Voigts-Hoffmann, J. P. Erzberger, M. Leibundgut, R. Aebersold, N. Ban
Date :  08 Nov 13  (Deposition) - 18 Dec 13  (Release) - 29 Jan 14  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  4.90
Chains :  Asym./Biol. Unit :  A,B#,D,E,F,I,N,O,P,Q,R,S,T,U,V,W,X,Y,b,c,h,i,l,o,u,v,w,x,z,0,1,2,3,5,6,7,8,9
#:   chains that contain no standard or modified protein/DNA/RNA residue)
 
Keywords :  Ribosome, Mammalian Mitochondrial Ribosome, 39S Large Ribosomal Subunit, Translation, Ribosomal Proteins, Rrna, Polypeptide Exit Site, Membrane Association (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  B. J. Greber, D. Boehringer, A. Leitner, P. Bieri, F. Voigts-Hoffmann J. P. Erzberger, M. Leibundgut, R. Aebersold, N. Ban
Architecture Of The Large Subunit Of The Mammalian Mitochondrial Ribosome.
Nature V. 505 515 2014
PubMed-ID: 24362565  |  Reference-DOI: 10.1038/NATURE12890

(-) Compounds

Molecule 1 - MRPL27
    Chains0
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 2 - MRPL28
    Chains1
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 3 - MRPL47
    Chains2
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 4 - MRPL30
    Chains3
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 5 - MRPL32
    Chains5
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 6 - MRPL33
    Chains6
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 7 - MRPL34
    Chains7
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 8 - MRPL35
    Chains8
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 9 - MRPL36
    Chains9
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 10 - 16S RRNA
    ChainsA
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 11 - UNASSIGNED RNA
    ChainsB
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 12 - MRPL2
    ChainsD
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 13 - MRPL3
    ChainsE
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 14 - MRPL4
    ChainsF
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 15 - MRPL9
    ChainsI
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 16 - MRPL13
    ChainsN
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 17 - MRPL14
    ChainsO
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 18 - MRPL15
    ChainsP
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 19 - MRPL16
    ChainsQ
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 20 - MRPL17
    ChainsR
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 21 - MRPL18
    ChainsS
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 22 - MRPL19
    ChainsT
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 23 - MRPL20
    ChainsU
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 24 - MRPL21
    ChainsV
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 25 - MRPL22
    ChainsW
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 26 - MRPL23
    ChainsX
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 27 - MRPL24
    ChainsY
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 28 - MRPL38
    Chainsb
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 29 - MRPL39
    Chainsc
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 30 - MRPL44
    Chainsh
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 31 - MRPL45
    Chainsi
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 32 - MRPL49
    Chainsl
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 33 - MRPL52
    Chainso
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 34 - ICT1
    Chainsu
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 35 - UNASSIGNED HELICES
    Chainsv, w
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 36 - THIOREDOXIN FOLD
    Chainsx
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825
 
Molecule 37 - UNASSIGNED HELICES
    Chainsz
    OrganLIVER
    OrganelleMITOCHONDRIA
    Organism CommonDOMESTIC PIG
    Organism ScientificSUS SCROFA DOMESTICA
    Organism Taxid9825

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920212223242526272829303132333435363738
Asymmetric/Biological Unit ABDEFINOPQRSTUVWXYbchilouvwxz012356789
#:   chains that contain no standard or modified protein/DNA/RNA residue)
 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 948)

Asymmetric/Biological Unit (2, 948)
No.NameCountTypeFull Name
1UNK946Mod. Amino Acid
2ZN2Ligand/IonZINC ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECYS 5:110 , CYS 5:113 , CYS 5:123 , CYS 5:126BINDING SITE FOR RESIDUE ZN 51147
2AC2SOFTWARECYS 9:73 , CYS 9:76 , CYS 9:89 , HIS 9:95BINDING SITE FOR RESIDUE ZN 91100

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4CE4)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Lys V:150 -Pro V:151

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4CE4)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4CE4)

(-) Exons   (0, 0)

(no "Exon" information available for 4CE4)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain 0 from PDB  Type:PROTEIN  Length:76
 aligned with F1RT79_PIG | F1RT79 from UniProtKB/TrEMBL  Length:148

    Alignment length:98
                                    47        57        67        77        87        97       107       117       127        
          F1RT79_PIG     38 SSKNLGGKSPGKRFGIKKMEGHYVHAGNILATQRHFRWHPGAHVGLGKNKCLYALEEGVVRYTKEVYVPNPSNSEAVDLVTRLPQGAVLYKTFVHVVP  135
               SCOP domains -------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............ee......ee....eeee......ee...ee......eee...eeeeeeee..----------------------.eeeeeee. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------- Transcript
                4ce4 0   38 SSKNLGGKSPGKRFGIKKMEGHYVHAGNILATQRHFRWHPGAHVGLGKNKCLYALEEGVVRYTKEVY----------------------YKTFVHVVP  135
                                    47        57        67        77        87        97      |  -         -       127        
                                                                                            104                    127        

Chain 1 from PDB  Type:PROTEIN  Length:58
                                                                                           
               SCOP domains ---------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee..........eeeee......eeeee....eeeee..hhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------- Transcript
                4ce4 1   82 GEGWVLGHRYVNNDKLSKRVRKVWKPQLFQRELYSEILDKRFTVTVTMRTLDLIDQAC  139
                                    91       101       111       121       131        

Chain 2 from PDB  Type:PROTEIN  Length:76
 aligned with F1SGC7_PIG | F1SGC7 from UniProtKB/TrEMBL  Length:253

    Alignment length:76
                                    96       106       116       126       136       146       156      
          F1SGC7_PIG     87 SWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVVDSMDALDKVVQEREDALRLLQTG  162
               SCOP domains ---------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------- Transcript
                4ce4 2   86 SWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVVDSMDALDKVVQEREDALRLLQTG  161
                                    95       105       115       125       135       145       155      

Chain 3 from PDB  Type:PROTEIN  Length:59
 aligned with F1STE5_PIG | F1STE5 from UniProtKB/TrEMBL  Length:161

    Alignment length:59
                                    74        84        94       104       114         
          F1STE5_PIG     65 KLHIVTRIKSTKRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLIRIKPLK  123
               SCOP domains ----------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........hhhhhhhhhhhh.......eeee.hhhhhhhhhhhhhhheeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------- Transcript
                4ce4 3   65 KLHIVTRIKSTKRRPYWEKDIIKMLGLEKAHTPQVHKNIPSVNAKLKVVKHLIRIKPLK  123
                                    74        84        94       104       114         

Chain 5 from PDB  Type:PROTEIN  Length:68
 aligned with I3LTC4_PIG | I3LTC4 from UniProtKB/TrEMBL  Length:188

    Alignment length:68
                                    88        98       108       118       128       138        
          I3LTC4_PIG     79 AAPKNRRSIEVNRCRRRNPQKLIKVKNNIDVCPECGHLKQKHILCGYCYEKVRKETAEIRRQMGKQEG  146
               SCOP domains -------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhh...........eee......eee........hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------- Transcript
                4ce4 5   79 AAPKNRRSIEVNRCRRRNPQKLIKVKNNIDVCPECGHLKQKHILCGYCxxxxxxxxxxxxxxxxxxxx  146
                                    88        98       108       118       128|||||||138||||||||
                                                                          127-UNK||136-UNK||145-UNK
                                                                           128-UNK||137-UNK||146-UNK
                                                                            129-UNK||138-UNK||  
                                                                             130-UNK| 139-UNK|  
                                                                              131-UNK  140-UNK  
                                                                               132-UNK  141-UNK 
                                                                                133-UNK  142-UNK
                                                                                 134-UNK  143-UNK
                                                                                  135-UNK  144-UNK

Chain 6 from PDB  Type:PROTEIN  Length:48
 aligned with I3LHI5_PIG | I3LHI5 from UniProtKB/TrEMBL  Length:66

    Alignment length:49
                                    22        32        42        52         
          I3LHI5_PIG     13 SKTTLVKMMSKAATGYSFHTKRNRRREKMTLLHYDLVVREKKVLFVEEK   61
               SCOP domains ------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee....eeeeeeee.......eeeeee....-eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------- Transcript
                4ce4 6   13 SKTILVKMMSQAGTGFSFNTKRSRLREKLTLLHYDPVVK-KKVLFVEQK   60
                                    22        32        42        |-|        
                                                                 51 |        
                                                                   52        

Chain 7 from PDB  Type:PROTEIN  Length:43
 aligned with A0A0R4J8D6_P | A0A0R4J8D6 from UniProtKB/TrEMBL  Length:167

    Alignment length:80
                                    40        50        60        70        80        90       100       110
        A0A0R4J8D6_P     31 GTPEYPSFVESVDEYHFVERLLPPASIPKPPKHEHYPTPSGWQPPRADPAPSLPYFVRRSRMHNIPVYRDITHGNRQMTV  110
               SCOP domains -------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .-----------....-------.hhhhh--hhhh-----hhhhhhhhhh-hhhhhhh--hhh---------hh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------- Transcript
                4ce4 7   53 G-----------NEYQ-------PSNIKR--KHKH-----GWVRRLRTPT-GVQVILR--RMH---------KGRKSLSH   95
                            |        -  |  |   -   |    |- |  |    -|       77 |     | -| |      -  |     95
                           53          54 57      58   63 64 67    68       77 |    84 85 |        88       
                                                                              78         87                 

Chain 7 from PDB  Type:PROTEIN  Length:43
 aligned with W5IDC1_PIG | W5IDC1 from UniProtKB/TrEMBL  Length:95

    Alignment length:43
                                    62        72        82        92   
          W5IDC1_PIG     53 GNEYQPSNIKRKHKHGWVRRLRTPTGVQVILRRMHKGRKSLSH   95
               SCOP domains ------------------------------------------- SCOP domains
               CATH domains ------------------------------------------- CATH domains
               Pfam domains ------------------------------------------- Pfam domains
         Sec.struct. author ......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------- PROSITE
                 Transcript ------------------------------------------- Transcript
                4ce4 7   53 GNEYQPSNIKRKHKHGWVRRLRTPTGVQVILRRMHKGRKSLSH   95
                                    62        72        82        92   

Chain 8 from PDB  Type:PROTEIN  Length:60
 aligned with F1SVC5_PIG | F1SVC5 from UniProtKB/TrEMBL  Length:188

    Alignment length:60
                                   112       122       132       142       152       162
          F1SVC5_PIG    103 KRKTVKAVIYRFLRLHSGLWLRRKAGYKKKLWKKTAARKRRLREFVFCNKTQSKLLDKMT  162
               SCOP domains ------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------ Pfam domains
         Sec.struct. author ....hhhhhhheee.....eeee...........hhhhhhhhh.eee.hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------ Transcript
                4ce4 8  103 KRKTVKAVIYRFLRLHSGLWLRRKAGYKKKLWKKTAARKRRLREFVFCNKTQSKLLDKMT  162
                                   112       122       132       142       152       162

Chain 9 from PDB  Type:PROTEIN  Length:36
 aligned with I3LDE8_PIG | I3LDE8 from UniProtKB/TrEMBL  Length:100

    Alignment length:36
                                    73        83        93      
          I3LDE8_PIG     64 KTKGVLKKRCRDCYLVKRRGRWFIYCKTNPKHKQRQ   99
               SCOP domains ------------------------------------ SCOP domains
               CATH domains ------------------------------------ CATH domains
               Pfam domains ------------------------------------ Pfam domains
         Sec.struct. author ............eeeeee..eeeeee..hhhhhee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------ PROSITE
                 Transcript ------------------------------------ Transcript
                4ce4 9   64 KTKGVLKKRCRDCYLVKRRGRWFIYCKTNPKHKQRQ   99
                                    73        83        93      

Chain A from PDB  Type:RNA  Length:1437
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              
                4ce4 A    1 ACCAAAGCUAGCUCAACAUAAAUAAAAUAAAACAUUCACCUAACAUUAAAGUAUAGGAGAUAGAAAUUUUUAUCCUGACGCUAUAGAGAUAGUACCGUAAGGGAAAGAUGAAAGAAUAAAAUAAAAGUAAAAAAAAGCAAAGAUUACCCCUUCUACCUUUUGCAUAAUGGUUUAACCAGAAAAAAUCUAACAAAGAGAACUUUAGCUAGAUACCCCGAAACCAGACGAGCUACCCAUGAGCAGUUUAAAAGAACCAACUCAUCUAUGUGGCAAAAUAGUGAGAAGACUUGUAGGUAGAGGUGAAAAGCCUAACGAGCCUGGUGAUAGCUGGUUGUCCGAGAAAGAAUUUUAGUUCAACCUUAAAAAUACCCCAAAAAUUCCAAUGUAUUUUUAAGAGAUAGUCUAAAAAGGUACAGCUUUUUAGAAACGGAUACAACCUUGACUAGAGAGUAAAUCUUAAUACACAUAAUCCCAAAAAAACAAACUCCUAGCCCAAUACCGGACUAAUCUAUUGAAACAUAGAAGCAAUAAUGUUAAUAUGAGUAACAAGAAGCCUUUCUCCUCGCACACGCUUACAUCAGUAACUAAUAAUAUACUGAUAAUUAACAACCAAUAAACCAAAACAACACUAAAACGUUUAUUAAUUACAUUGUUAACCCAACACAGGAGUGCACCAAGGAAAGAUUAAAAGAAGUAAAAGGAACUCGGCAAACACAAACCCCGCCUGUUUACCAAAAACAUCACCUCUAGCAUUACUAGUAUUAGAGGCAAUGCCUGCCCAGUGACACCAGUUUAACGGCCGCGGUAUUCUGACCGUGCAAAGGUAGCAUAAUCACUUGUUCUCCAAAUAAGGACUUGUAUGAAUGGCCACACGAGGGUUUUACUGUCUCUUACUUCCAAUCAGUGAAAUUAACCUUCCCGUGAAGAGGCGGGAAUAAAAAAAUAAGACGAGAAGACCCUAUGGAGCUUUAAUUAACUAUUCCAAAAGUUAAACUUAACAUGGACUAGCAAUUUCGGUUGGGGUGACCUCGGAGUACAAAAAACCCUCCGAGUGAUUUUAAUCUAGACAAACCAGUCAAAAUAACCCAUCACUUAUUGAUCCAAAAUUUUGAUCAACGGAACAAGUUACCCUAGGGAUAACAGCGCAAUCCUGUUCUAGAGUUCCUAUCGACAAUAGGGUUUACGACCUCGAUGUUGGAUCAGGACACCCAAAUGGUGCAGCCGCUAUUAAAGGUUCGUUUGUUCAACGAUUAAAGUCCUACGUGAUCUGAGUUCAGACCGGAGCAAUCCAGGUCGGUUUCUAUCUAUUAUAAAUUUCUCCCAGUACGAAAGGACAAGAGAAAUGGGACCAACCUCACAAACGCGUCUCAGAGAUAAUUAAUGAUUUAAUCUUAACCUAAUUAACUCAUAAUAAAUCCAGCCCUAGAACAGGGCACA 1569
                                    10        45        55        65        75        85        95       105       115       125  |    134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334       344       354       364       374       384       394     ||411       421       431       441       451       461       471       481       491  ||   564       579       589       599       609       619       629       639       649       659       669       679       689       699       709       719       729       739       749       759       769       779       789       799       809       819       829       839       849       859       869       879       889       899       909       919       929       939       949       959       969       979       989       999      1009      1019      1029      1039      1049      1059      1069      1079      1089 ||   1128      1138      1148      1158      1168      1178      1188      1198      1208     |1222      1232      1242      1252      1262      1272      1282      1292      1302      1312      1322      1332      1342      1352      1362      1372      1382      1392      1402      1412      1422      1432      1442      1452      1462      1472      1482      1492      1502      1512      1522      1532      1542      1552      1562       
                                             19|                                                                               127A                                                                                                                                                                                                                                                                              400|                                                                                   494|           572|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             1091|                                                                                         1214|                                                                                                                                                                                                                                                                                                                                                              
                                              45                                                                                                                                                                                                                                                                                                                                                                  408                                                                                    558            578                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              1121                                                                                          1219                                                                                                                                                                                                                                                                                                                                                              

Chain D from PDB  Type:PROTEIN  Length:200
 aligned with F1RRN2_PIG | F1RRN2 from UniProtKB/TrEMBL  Length:306

    Alignment length:200
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274
          F1RRN2_PIG     75 MPVKMRKSGGRNHTGQIQVHGIGGGHKQRYRMIDFLRFRPEHESKPGPFEEKVIAVRYDPCRSADIALVAGGNRKRWIIATENMKAGDTVLNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCIATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSG  274
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eee........................eee........hhhhh....eeeeeeeee........eeeee....eeeee.........eeee...............eee........eee...................eeeeeee..eeeee.....eeeee...eeee......hhhhh...hhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 D   75 MPVKMRKSGGRNHTGQIQVHGIGGGHKQRYRMIDFLRFRPEHESKPGPFEEKVIAVRYDPCRSADIALVAGGNRKRWIIATENMKAGDTVLNSDHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLLRKVNGTAIIQLPSKRQMQVLETCIATVGRVSNVDHNKRVIGKAGRNRWLGKRPNSG  274
                                    84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274

Chain E from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                 
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeeeeee.....eeeeeeee....eeeeee.......eeeeeee..........hhhhhhhhhhh......eeeeeee............hhhhh....eeeeeee....eee..........................................eee...eeeeeeeeeeeee....eeeee.........eeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 E  148 VGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTPKENHNGRMAALTVGGKTVSHFHKSASILEFYQELGLPPKQKVKIFNVTENAVIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMRRWGFKGQPATHGQTKTHRRPGAISTGDVARVWPGTKMPGQLGNIDRTAFGLKVWRINTKHNIIYVNGSVPGHKNCLVKIKDSKL  355
                                   157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347        

Chain F from PDB  Type:PROTEIN  Length:224
 aligned with F1S3J8_PIG | F1S3J8 from UniProtKB/TrEMBL  Length:294

    Alignment length:224
                                    68        78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278    
          F1S3J8_PIG     59 RRPVQAWIESLRGYEQERVGLTELHPDVFSTAPRLDILHQVAIWQKNFKRISYAKTKTRAEVRGGGRKPWVQKGSGRARHGSIRSPIWRGGGVAHGPRGPTSYYYMLPMKVRVQGLKVALTVKLAQDDLHIVDSLELPTADPQYLIELARYRRWGDSVLLVDLEHEDMPQNVVAATSGLKTFNLVPAVGLNVHSMLKHQTLVLTLPTVAFLEEKLLWHNSRYTP  282
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eee.............eee.........hhhhhhhhhhhhhhh...........................................................hhhhhhhhhhhhhhhhhhh..eeee........hhhhhhhhhhhh.....eeee......hhhhhhhhh.....eeeehhhhhhhhhhhhh.eeeeehhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 F   59 xxxxxxxxxxxxxxxxxxxGLTELHPDVFSTAPRLDILHQVAIWQKNFKRISYAKTKTRAEVRGGGRKPWVQKGSGRARHGSIRSPIWRGGGVAHGPRGPTSYYYMLPMKVRVQGLKVALTVKLAQDDLHIVDSLELPTADPQYLIELARYRRWGDSVLLVDLEHEDMPQNVVAATSGLKTFNLVPAVGLNVHSMLKHQTLVLTLPTVAFLEEKLxxxxxxxxx  282
                            ||||||||68||||||||78        88        98       108       118       128       138       148       158       168       178       188       198       208       218       228       238       248       258       268     ||278||||
                           59-UNK|||68-UNK|||77-UNK                                                                                                                                                                                              274-UNK||||
                            60-UNK|||69-UNK|||                                                                                                                                                                                                    275-UNK|||
                             61-UNK|| 70-UNK||                                                                                                                                                                                                     276-UNK||
                              62-UNK|  71-UNK|                                                                                                                                                                                                      277-UNK|
                               63-UNK   72-UNK                                                                                                                                                                                                       278-UNK
                                64-UNK   73-UNK                                                                                                                                                                                                       279-UNK
                                 65-UNK   74-UNK                                                                                                                                                                                                       280-UNK
                                  66-UNK   75-UNK                                                                                                                                                                                                       281-UNK
                                   67-UNK   76-UNK                                                                                                                                                                                                       282-UNK

Chain I from PDB  Type:PROTEIN  Length:57
 aligned with I3LR45_PIG | I3LR45 from UniProtKB/TrEMBL  Length:268

    Alignment length:57
                                   103       113       123       133       143       
          I3LR45_PIG     94 LELVLTQSVEELGVRGDLVSVKKSVGRNRLLPQGLAVYASPENKKLFEEEKLLRQEG  150
               SCOP domains --------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee............eee.hhhhhhhh......ee..hhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------- Transcript
                4ce4 I   94 LELVLTQSVEELGVRGDLVSVKKSVGRNRLLPQGLAVYASPENKKLFEEEKLLRQEG  150
                                   103       113       123       133       143       

Chain N from PDB  Type:PROTEIN  Length:147
 aligned with F1S286_PIG | F1S286 from UniProtKB/TrEMBL  Length:178

    Alignment length:147
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       
          F1S286_PIG      1 MSSFSKAPQQWATFARVWYLLDGKMQPPGKLAAMASVKLQGLHKPVYHQLSDCGDHVVIMNTRHIAFSGNKWEQKVYSSHTGYPGGFRQVTAAQLHQKDPVAIVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQ  147
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................eeee.......hhhhhhhhhhhhh..............eeee.hhhhh....hhhhhheeeee......eeeeehhhhhhhhhhhhhhhhhhh....hhhhhhhhh.eee.....hhhhh...ee..... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 N    1 MSSFSKAPQQWATFARVWYLLDGKMQPPGKLAAMASVKLQGLHKPVYHQLSDCGDHVVIMNTRHIAFSGNKWEQKVYSSHTGYPGGFRQVTAAQLHQKDPVAIVKLAIYGMLPKNLHRRTMMQRLHLFPDEDIPEDILKNLVEELPQ  147
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       

Chain O from PDB  Type:PROTEIN  Length:114
 aligned with F1RQV7_PIG | F1RQV7 from UniProtKB/TrEMBL  Length:145

    Alignment length:114
                                    41        51        61        71        81        91       101       111       121       131       141    
          F1RQV7_PIG     32 IQKMTRVRVVDNSALGTTPYHRPPRCIHVYNKTGVGKVGDRILLAIRGQKKKALIVGHRMPGPRMTPRFDSNNVVLLEDNGNPVGTRIKTPIPSSLRQREGEFSKVLAIAQNFV  145
               SCOP domains ------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......ee...............eeeee...........eeeeee..eeeeeee...........eee...eeeee..............eehhhhhhh..hhhhhhhh..ee Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                4ce4 O   32 IQKMTRVRVVDNSALGTTPYHRPPRCIHVYNKTGVGKVGDRILLAIRGQKKKALIVGHRMPGPRMTPRFDSNNVVLLEDNGNPVGTRIKTPIPSSLRQREGEFSKVLAIAQNFV  145
                                    41        51        61        71        81        91       101       111       121       131       141    

Chain P from PDB  Type:PROTEIN  Length:169
 aligned with F1RSH0_PIG | F1RSH0 from UniProtKB/TrEMBL  Length:296

    Alignment length:169
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168         
          F1RSH0_PIG      9 GPRALDLLRALPRVSLANLKPNPGSRKPERRPRGRRRGRKCGRGHKGERQRGTRPRLGFEGGQTPFYLRIPKYGFNEGHSFRHQYQPLSLNRLQYLIDLGRVDPTQPIDLTQLVNGRGVTIQPSKRDYGVQLVEEGADTFKAKVNIEVQMASELAIAAIEKNGGVVTTA  177
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhh.....hhhhh..........................hhhhhh..............hhhhh...hhhhhhhhh..eeeeehhhhhhhhhh.........hhhhhhhh............eeeee...........eeee...hhhhhhhhhhh..eeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 P    9 xxxxxxxxxxxxxVSLANLKPNPGSRKPERRPRGRRRGRKCGRGHKGERQRGTRPRLGFEGGQTPFYLRIPKYGFNEGHSFRHQYQPLSLNRLQYLIDLGRVDPTQPIDLTQLVNGRGVTIQPSKRDYGVQLVEEGADTFKAKVNIEVQMASELAIAAIEKNGGVVTTA  177
                            ||||||||18|||     28        38        48        58        68        78        88        98       108       118       128       138       148       158       168         
                            9-UNK|||18-UNK                                                                                                                                                           
                            10-UNK|||19-UNK                                                                                                                                                          
                             11-UNK|| 20-UNK                                                                                                                                                         
                              12-UNK|  21-UNK                                                                                                                                                        
                               13-UNK                                                                                                                                                                
                                14-UNK                                                                                                                                                               
                                 15-UNK                                                                                                                                                              
                                  16-UNK                                                                                                                                                             
                                   17-UNK                                                                                                                                                            

Chain Q from PDB  Type:PROTEIN  Length:154
 aligned with F1RI89_PIG | F1RI89 from UniProtKB/TrEMBL  Length:251

    Alignment length:154
                                    64        74        84        94       104       114       124       134       144       154       164       174       184       194       204    
          F1RI89_PIG     55 RVPLVPKVRRERKNLSDIRGPSTEATEFTEGRFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFALWRVPAPFKPITRKGMGQRMGGGKGAIDHYVTPVKAGRLIVEMGGRCEFKEVQGFLDLVAHKLPFPAKAVSRETLEKMRKDQEERERN  208
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............hhhhhh..hhhhh.....eeeee...eeeehhhhhhhhhhhhhh.....eeee.......eeeee............eeeeeeeee.......eeee..hhhhhhhhhhhhhhh....eeeehhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 Q   55 RVPLVPKVRRERKNLSDIRGPSTEATEFTEGRFAILALGGGYLHWGHFEMMRLTINRSMDPKNMFALWRVPAPFKPITRKGMGQRMGGGKGAIDHYVTPVKAGRLIVEMGGRCEFKEVQGFLDLVAHKLPFPAKAVSxxxxxxxxxxxxxxxxx  208
                                    64        74        84        94       104       114       124       134       144       154       164       174       184       194|||||||204||||
                                                                                                                                                                   192-UNK||201-UNK|||
                                                                                                                                                                    193-UNK||202-UNK||
                                                                                                                                                                     194-UNK||203-UNK|
                                                                                                                                                                      195-UNK| 204-UNK
                                                                                                                                                                       196-UNK  205-UNK
                                                                                                                                                                        197-UNK  206-UNK
                                                                                                                                                                         198-UNK  207-UNK
                                                                                                                                                                          199-UNK  208-UNK
                                                                                                                                                                           200-UNK    

Chain R from PDB  Type:PROTEIN  Length:120
 aligned with F1RMQ4_PIG | F1RMQ4 from UniProtKB/TrEMBL  Length:169

    Alignment length:120
                                    18        28        38        48        58        68        78        88        98       108       118       128
          F1RMQ4_PIG      9 ISHGRVFRRLGLGPESRIHLLQNLLTGLVRHERIEASWARVDELRGYAEKLIDYGKLGDTNERAMRMADFWLTEKDLIPKLFQVLAPRFQGQNGGYTRMLQIPNRNEQDRAKMAVIEYKG  128
               SCOP domains ------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhheeeeehhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh...hhhhhhhhhhhhhh........eeeeeeee......eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------ Transcript
                4ce4 R    9 ISHGRVFRRLGLGPESRIHLLQNLLTGLVRHERIEASWARVDELRGYAEKLIDYGKLGDTNERAMRMADFWLTEKDLIPKLFQVLAPRFQGQNGGYTRMLQIPNRNEQDRAKMAVIEYKG  128
                                    18        28        38        48        58        68        78        88        98       108       118       128

Chain S from PDB  Type:PROTEIN  Length:94
 aligned with A0A0R4J8D5_P | A0A0R4J8D5 from UniProtKB/TrEMBL  Length:180

    Alignment length:94
                                    88        98       108       118       128       138       148       158       168    
        A0A0R4J8D5_P     79 HRLRVIRTQHHIEALVEHRNGQVVVSASTREWAIKKHLYSTRNVVACESVGRVLAERCLEAGINFMVYHPTPWEAASDSIKRLQHAMTEGGVVL  172
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee....eeeeee.....eeeeehhhhhhhhh......hhhhhhhhhhhhhhhhhhh.....ee....hhhhhhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------- Transcript
                4ce4 S   79 HRLRVIRTQHHIEALVEHRNGQVVVSASTREWAIKKHLYSTRNVVACESVGRVLAERCLEAGINFMVYHPTPWEAASDSIKRLQHAMTEGGVVL  172
                                    88        98       108       118       128       138       148       158       168    

Chain T from PDB  Type:PROTEIN  Length:119
 aligned with I3LNJ0_PIG | I3LNJ0 from UniProtKB/TrEMBL  Length:292

    Alignment length:119
                                    96       106       116       126       136       146       156       166       176       186       196         
          I3LNJ0_PIG     87 TNPLKFQIERKDMLERRKILHIPEFYVGSILRVTTADPYASAKTSQFLGICIQRSGSGLGATFILRNTIEGQGVEICFELYNPRIQEIQVVKLEKRLDNSLLYLRDALPEYSTFDVNMK  205
               SCOP domains ----------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh........eeeeeee.........eeeeeeeeeee......eeeeeeee..eeeeeeee.....eeeeeeeee.......hhhhhh.hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 T   87 TNPLKFQIERKDMLERRKILHIPEFYVGSILRVTTADPYASAKTSQFLGICIQRSGSGLGATFILRNTIEGQGVEICFELYNPRIQEIQVVKLEKRLDNSLLYLRDALPEYSTFDVNMK  205
                                    96       106       116       126       136       146       156       166       176       186       196         

Chain U from PDB  Type:PROTEIN  Length:123
 aligned with F1RJD0_PIG | F1RJD0 from UniProtKB/TrEMBL  Length:149

    Alignment length:123
                                    19        29        39        49        59        69        79        89        99       109       119       129   
          F1RJD0_PIG     10 LRSRVTDRYWRVQEVLKHARHFRGRKNRCYRLAVRAVTRAFVKCTRARRLKKRSLRTLWINRITAASQEHGLKYPAFIINLIKCQVELNRKVLADLAIYEPKTFKSLAALAKRRREEGFAAAL  132
               SCOP domains --------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 U   10 LRSRVTDRYWRVQEVLKHARHFRGRKNRCYRLAVRAVTRAFVKCTRARRLKKRSLRTLWINRITAASQEHGLKYPAFIINLIKCQVELNRKVLADLAIYEPKTFKSLAALAKRRRxxxxxxxx  132
                                    19        29        39        49        59        69        79        89        99       109       119     ||129|||
                                                                                                                                             125-UNK|||
                                                                                                                                              126-UNK||
                                                                                                                                               127-UNK|
                                                                                                                                                128-UNK
                                                                                                                                                 129-UNK
                                                                                                                                                  130-UNK
                                                                                                                                                   131-UNK
                                                                                                                                                    132-UNK

Chain V from PDB  Type:PROTEIN  Length:109
 aligned with F1RY70_PIG | F1RY70 from UniProtKB/TrEMBL  Length:209

    Alignment length:109
                                   108       118       128       138       148       158       168       178       188       198         
          F1RY70_PIG     99 LFAVVHFAGHQWKVTAEDLILIENELDVACGERIRLEKVLLVGADNFTLLGKPLLGKELVRVEATVIEKTESWPKINMKFQKRKNYQRKRITVNPQTVLRINSIEIAPC  207
               SCOP domains ------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee..eeeee....eeeee.........eeee...eeee...eee..........eeeeeeeee......eeeeeee....eeeeeee...eeeeeeeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 V   99 LFAVVHFAGHQWKVTAEDLILIENELDVACGERIRLEKVLLVGADNFTLLGKPLLGKELVRVEATVIEKTESWPKINMKFQKRKNYQRKRITVNPQTVLRINSIExxxx  207
                                   108       118       128       138       148       158       168       178       188       198     ||||
                                                                                                                                   204-UNK
                                                                                                                                    205-UNK
                                                                                                                                     206-UNK
                                                                                                                                      207-UNK

Chain W from PDB  Type:PROTEIN  Length:134
 aligned with W5IDB8_PIG | W5IDB8 from UniProtKB/TrEMBL  Length:134

    Alignment length:134
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    
          W5IDB8_PIG      1 EIYHCRRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFSDKKGAQIIKEVLLEAQDMAVRDHNVEFRSNLYVAESTSGRGQYLKRIRYHGRGRFGIMEKVFCHYFVKLVEGXXXXXXXXXXXXXXXXXXXXXXXX  134
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee..hhhhhhhhhh.....hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh....hhh.eeeeeeeeee...eeeeee.....eeeeee..eeeeeeeee.........hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 W   70 EIYHCRRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFSDKKGAQIIKEVLLEAQDMAVRDHNVEFRSNLYVAESTSGRGQYLKRIRYHGRGRFGIMEKVFCHYFVKLVEGxxxxxxxxxxxxxxxxxxxxxxxx  203
                                    79        89        99       109       119       129       139       149       159       169       179|||||||189|||||||199||||
                                                                                                                                        180-UNK||189-UNK||198-UNK|
                                                                                                                                         181-UNK||190-UNK||199-UNK
                                                                                                                                          182-UNK||191-UNK||200-UNK
                                                                                                                                           183-UNK| 192-UNK| 201-UNK
                                                                                                                                            184-UNK  193-UNK  202-UNK
                                                                                                                                             185-UNK  194-UNK  203-UNK
                                                                                                                                              186-UNK  195-UNK    
                                                                                                                                               187-UNK  196-UNK   
                                                                                                                                                188-UNK  197-UNK  

Chain X from PDB  Type:PROTEIN  Length:87
 aligned with W5IDB9_PIG | W5IDB9 from UniProtKB/TrEMBL  Length:87

    Alignment length:87
                                    10        20        30        40        50        60        70        80       
          W5IDB9_PIG      1 XXXXXXXXXXXXXXPEDTVQFRIPMEMTRVDLRNYLERIYNVPVAAVRTRVQYGSNRRRDHRNIRIKKPDYKVAYVQLALGQXXXXX   87
               SCOP domains --------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee............eeeeee....hhhhhhhhhhhh....eeeeeeeee...eeee....eeee...eeeeeeee......... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------- Transcript
                4ce4 X   22 xxxxxxxxxxxxxxPEDTVQFRIPMEMTRVDLRNYLERIYNVPVAAVRTRVQYGSNRRRDHRNIRIKKPDYKVAYVQLALGQxxxxx  108
                            ||||||||31||||    41        51        61        71        81        91       101  |||||
                            |||||||30-UNK|                                                                  104-UNK
                           22-UNK|||31-UNK                                                                   105-UNK
                            23-UNK|| 32-UNK                                                                   106-UNK
                             24-UNK|  33-UNK                                                                   107-UNK
                              25-UNK   34-UNK                                                                   108-UNK
                               26-UNK   35-UNK                                                                     
                                27-UNK                                                                             
                                 28-UNK                                                                            
                                  29-UNK                                                                           

Chain Y from PDB  Type:PROTEIN  Length:103
 aligned with F1RHJ1_PIG | F1RHJ1 from UniProtKB/TrEMBL  Length:216

    Alignment length:103
                                    62        72        82        92       102       112       122       132       142       152   
          F1RHJ1_PIG     53 DWHLFCGDKVEILEGKDAGKQGKVVQVIRQRNWVVVEGLNTHYRYVGKTVDYRGTMIPSEAPLLHNQVKLVDPTDRKPTDVEWRFTEAGERVRVSTRSGRIIP  155
               SCOP domains ------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeee........eeeeeeee....eeee....eeeeeee......eeeeeee..ee...eeee......ee.eeeee.....eeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                4ce4 Y   53 DWHLFCGDKVEILEGKDAGKQGKVVQVIRQRNWVVVEGLNTHYRYVGKTVDYRGTMIPSEAPLLHNQVKLVDPTDRKPTDVEWRFTEAGERVRVSTRSGRIIP  155
                                    62        72        82        92       102       112       122       132       142       152   

Chain b from PDB  Type:PROTEIN  Length:192
 aligned with F1RW03_PIG | F1RW03 from UniProtKB/TrEMBL  Length:380

    Alignment length:192
                                   154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334  
          F1RW03_PIG    145 PYHKQRLAEYCGLYRDLFHGATFVPRVPLHVAYAVGEDDLMPVYHGNEVTPTEAAQAPEVTYEADEGSLWTLLLTNLDGHLLEPDAEYVHWLVTNIPGNRVTEGQETCPYLPPFPARGSGFHRFAFLLFKQDKRIDFSGDTRPSPCYQLAQRTFHTFDFYKKHQDAMTPAGLAFFQCRWDDSVTRVFHQLLD  336
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhh..hhhhhh.........eeeeee..eee......eee..hhhhh..eee.......eeeeeeeee..........eeeeeeeeee.......eeee.............eeeeeeeeee.......................hhhhhhhhhh......eeeeeee....hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4ce4 b  145 PYHKQRLAEYCGLYRDLFHGATFVPRVPLHVAYAVGEDDLMPVYHGNEVTPTEAAQAPEVTYEADEGSLWTLLLTNLDGHLLEPDAEYVHWLVTNIPGNRVTEGQETCPYLPPFPARGSGFHRFAFLLFKQDKRIDFSGDTRPSPCYQLAQRTFHTFDFYKKHQDAMTPAGLAFFQCRWDDSVTRVFHQLLD  336
                                   154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304       314       324       334  

Chain c from PDB  Type:PROTEIN  Length:292
 aligned with F1SHP6_PIG | F1SHP6 from UniProtKB/TrEMBL  Length:337

    Alignment length:292
                                    46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326  
          F1SHP6_PIG     37 PTELIEMQNDLFNKEKNRQLSLTPRTEKIEVKHVGKTDPGTVFVMNKNISTPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDDDPGEVNKAYWRSCAMMMGCVIERAFKDEYVVSLVRAPEVPVIAGAFCYDVVLDKRLDEWMPTKENLHSFTKDARALIYKDLPFETLEVEAKVALEIFQHNKYKLDFIEEKASQNPERIVKLHRFGDFIDVSEGPLIPRTSICFQYEVSAVHNLQTQSSLVRRFQGLSLPVHLRAHFTIWNKLLERSRKMVTEDKT  328
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhh......eeeeee...eeeeee.....hhhhhhhhhhhhhhhh..eeee..eeee......eee.eeee......hhhhhhhhhhhhhhhhhhhhhhhh.......eee...eee...eeeeeeeehhhhhhh..hhhhhhhhhhhhhhhhhh....eeeeeehhhhhhhh..hhhhhhhhhhhhhhh...eeeeeee..eeee..............eeeeeeeeeee..eeeeeeeeee.hhhh...hhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 c   34 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHVGKTDPGTVFVMNKNISTPYSCAMHLSEWYCRKSILALVDGQPWDMYKPLTKSCEIKFLTFKDDDPGEVNKAYWRSCAMMMGCVIERAFKDEYVVSLVRAPEVPVIAGAFCYDVVLDKRLDEWMPTKENLHSFTKDARALIYKDLPFETLEVEAKVALEIFQHNKYKLDFIEEKASQNPERIVKLHRFGDFIDVSEGPLIPRTSICFQYEVSAVHNLQTQSSLVRRFQGLSLPVHLRAHFTIWNKLLERSRKMVTEDKT  325
                            ||||||||43||||||||53||||||||63||      73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323  
                           34-UNK|||43-UNK|||52-UNK|||61-UNK                                                                                                                                                                                                                                                                    
                            35-UNK|||44-UNK|||53-UNK|||62-UNK                                                                                                                                                                                                                                                                   
                             36-UNK|| 45-UNK|| 54-UNK|| 63-UNK                                                                                                                                                                                                                                                                  
                              37-UNK|  46-UNK|  55-UNK|  64-UNK                                                                                                                                                                                                                                                                 
                               38-UNK   47-UNK   56-UNK   65-UNK                                                                                                                                                                                                                                                                
                                39-UNK   48-UNK   57-UNK                                                                                                                                                                                                                                                                        
                                 40-UNK   49-UNK   58-UNK                                                                                                                                                                                                                                                                       
                                  41-UNK   50-UNK   59-UNK                                                                                                                                                                                                                                                                      
                                   42-UNK   51-UNK   60-UNK                                                                                                                                                                                                                                                                     

Chain h from PDB  Type:PROTEIN  Length:272
 aligned with F1SR64_PIG | F1SR64 from UniProtKB/TrEMBL  Length:332

    Alignment length:272
                                    44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304  
          F1SR64_PIG     35 FRAAYRFQKELERWRLLRCPPPPVRRSEKPNWDYHAEIQAFGHRLQETFSLDLLKTAFVNSCYIKSEEAKRQKLGIDKEAALLNLKDNQELSEQGISFSQTCLTQFFEDAFPDLPTEGVTSLVDFLTSEEVVCHVARNLAVEQLALSAEFPVPPPVLRQTFFAVIGALLQSSGPERTALFIRDFLITQMTGKELFEMWTITNPMGLLVEELKKRKISAPESRLTRQSGSTTALPVYFVGLYCDRKLIAEGPGETVLVAEEEAARVALRKLFG  306
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhh.................hhhhhhhhhhhhh....hhhhhhhhh.hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhh....hhhhhhhhhhhhhh....eeeeeeee.......eeeeeeee..eeeeeeee.hhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 h   35 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxDYHAEIQAFGHRLQETFSLDLLKTAFVNSCYIKSEEAKRQKLGIDKEAALLNLKDNQELSEQGISFSQTCLTQFFEDAFPDLPTEGVTSLVDFLTSEEVVCHVARNLAVEQLALSAEFPVPPPVLRQTFFAVIGALLQSSGPERTALFIRDFLITQMTGKELFEMWTITNPMGLLVEELKKRKISAPESRLTRQSGSTTALPVYFVGLYCDRKLIAEGPGETVLVAEEEAARVALRKLFG  306
                            ||||||||44||||||||54||||||||64||      74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244       254       264       274       284       294       304  
                           35-UNK|||44-UNK|||53-UNK|||62-UNK                                                                                                                                                                                                                                                
                            36-UNK|||45-UNK|||54-UNK|||63-UNK                                                                                                                                                                                                                                               
                             37-UNK|| 46-UNK|| 55-UNK|| 64-UNK                                                                                                                                                                                                                                              
                              38-UNK|  47-UNK|  56-UNK|  65-UNK                                                                                                                                                                                                                                             
                               39-UNK   48-UNK   57-UNK   66-UNK                                                                                                                                                                                                                                            
                                40-UNK   49-UNK   58-UNK                                                                                                                                                                                                                                                    
                                 41-UNK   50-UNK   59-UNK                                                                                                                                                                                                                                                   
                                  42-UNK   51-UNK   60-UNK                                                                                                                                                                                                                                                  
                                   43-UNK   52-UNK   61-UNK                                                                                                                                                                                                                                                 

Chain i from PDB  Type:PROTEIN  Length:161
 aligned with I3LGM5_PIG | I3LGM5 from UniProtKB/TrEMBL  Length:104

    Alignment length:161
                                                                                                                               1                                                             
                                     -         -         -         -         -         -         -         -         -         1        11        21        31        41        51        61 
          I3LGM5_PIG      - ---------------------------------------------------------------------------------------------------MNQGNIYGQVTVRMHTRQTLAIYDRFGRLMYGQEDVPRDVLEYVVFEKHLVDPYGSWRMHGK   62
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.eeeeee......eeeeeeeee....eeeeeeeeeeeeeeeeee....eeee.....eeeeeeeeeeeee....eeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                4ce4 i  104 GLAQRAERLKKNVASQLSIRKIRESDPNFKIKDFPEKAKDIFIEAHLCLNNSDHDRLHTLVTENCFPDMVWDIRYKTVRWSFVESLEPPQVVQVRCSSLMNQGNIYGQVTVRMHTRQTLAIYDRFGRLMYGQEDVPRDVLEYVVFEKHLVDPYGSWRMHGK  264
                                   113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263 

Chain l from PDB  Type:PROTEIN  Length:76
                                                                                                             
               SCOP domains ---------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eee.......eeeee....hhhhhhhhhhhhhhhhhh....eeee...eeeee...hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------- Transcript
                4ce4 l   91 MHNIPVYRDITHGNRQMTVIRKVEGDIWALQKDVEDFLSPLLGKTPVTQVNEVTGTLRVKGYFDQQLKAWLLEKGF  166
                                   100       110       120       130       140       150       160      

Chain o from PDB  Type:PROTEIN  Length:56
                                                                                         
               SCOP domains -------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------- Transcript
                4ce4 o   58 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx  113
                            ||||||||67||||||||77||||||||87||||||||97|||||||107||||||
                           58-UNK|||67-UNK|||76-UNK|||85-UNK|||94-UNK||103-UNK||112-UNK
                            59-UNK|||68-UNK|||77-UNK|||86-UNK|||95-UNK||104-UNK||113-UNK
                             60-UNK|| 69-UNK|| 78-UNK|| 87-UNK|| 96-UNK||105-UNK||  
                              61-UNK|  70-UNK|  79-UNK|  88-UNK|  97-UNK| 106-UNK|  
                               62-UNK   71-UNK   80-UNK   89-UNK   98-UNK  107-UNK  
                                63-UNK   72-UNK   81-UNK   90-UNK   99-UNK  108-UNK 
                                 64-UNK   73-UNK   82-UNK   91-UNK  100-UNK  109-UNK
                                  65-UNK   74-UNK   83-UNK   92-UNK  101-UNK  110-UNK
                                   66-UNK   75-UNK   84-UNK   93-UNK  102-UNK  111-UNK

Chain u from PDB  Type:PROTEIN  Length:90
 aligned with A0A140UHW4_P | A0A140UHW4 from UniProtKB/TrEMBL  Length:399

    Alignment length:216
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237      
        A0A140UHW4_P     28 RRNALKAEWRGAQRCSGRALLGLTMPGWGLLGRAGARVLGCGADGLGASRGLGNRTDICLLVRSLHGKSVTWWDEHLSEENVPFVKQLVSDENKAQLASKLCPLKDEPWPIHPWEPGSSRVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTPKENHNGRMAALTVGGKTVSHFHKSASILEFYQELGLPPKQKVKIFNVTENAVIKPGTP  243
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....hhhh-------------heee-e------------eee..-----..eeeeeeee......-----..hhhhh------hhhh..hhh--------------------------hh.-------------....-----eeeee...--.h---------------------hhhh---hhhhhhhh--------------hhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4ce4 u   67 QANDIPVDR-------------LTIS-Y------------CRSSG-----KVNSKAEVRFHLASAD-----WIAEPVR------LKLAVKHKN--------------------------RIN-------------RSGE-----LILTSECS--RY---------------------QFRN---LADCLQKL--------------RDMIAEASQP  163
                                    |-         -  |  | | -         -|   |    -|      102     |   - |     | -    |  121  |      -         -       125 |       -     |  |-    |  137 |  ||   -         -       144|   |  151 |       -      |157      
                                   75            76 79 |           81  85    93            108   109   115    116     124                        125 |           128  |   132    139  ||                   142  | 146    153            154         
                                                      80                                                                                           127              131             140|                      145                                   
                                                                                                                                                                                     141                                                            

Chain u from PDB  Type:PROTEIN  Length:90
 aligned with W5IDC0_PIG | W5IDC0 from UniProtKB/TrEMBL  Length:205

    Alignment length:97
                                    76        86        96       106       116       126       136       146       156       
          W5IDC0_PIG     67 QANDIPVDRLTISYCRSSGPGGQNVNKVNSKAEVRFHLASADWIAEPVRLKLAVKHKNRINRSGELILTSECSRYQFRNLADCLQKLRDMIAEASQP  163
               SCOP domains ------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhheeeeeee..-------..eeeeeeee........hhhhhhhhh..hhhhh.....eeeee....hhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------- Transcript
                4ce4 u   67 QANDIPVDRLTISYCRSSG-------KVNSKAEVRFHLASADWIAEPVRLKLAVKHKNRINRSGELILTSECSRYQFRNLADCLQKLRDMIAEASQP  163
                                    76        |-      | 96       106       116       126       136       146       156       
                                             85      93                                                                      

Chain v from PDB  Type:PROTEIN  Length:91
                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------- Transcript
                4ce4 v    1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx   91
                            ||||||||10||||||||20||||||||30||||||||40||||||||50||||||||60||||||||70||||||||80||||||||90|
                            ||||||||9-UNK|||18-UNK|||27-UNK|||36-UNK|||45-UNK|||54-UNK|||63-UNK|||72-UNK|||81-UNK|||90-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK|||37-UNK|||46-UNK|||55-UNK|||64-UNK|||73-UNK|||82-UNK|||91-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK|| 38-UNK|| 47-UNK|| 56-UNK|| 65-UNK|| 74-UNK|| 83-UNK||  
                              3-UNK|  12-UNK|  21-UNK|  30-UNK|  39-UNK|  48-UNK|  57-UNK|  66-UNK|  75-UNK|  84-UNK|  
                               4-UNK   13-UNK   22-UNK   31-UNK   40-UNK   49-UNK   58-UNK   67-UNK   76-UNK   85-UNK  
                                5-UNK   14-UNK   23-UNK   32-UNK   41-UNK   50-UNK   59-UNK   68-UNK   77-UNK   86-UNK 
                                 6-UNK   15-UNK   24-UNK   33-UNK   42-UNK   51-UNK   60-UNK   69-UNK   78-UNK   87-UNK
                                  7-UNK   16-UNK   25-UNK   34-UNK   43-UNK   52-UNK   61-UNK   70-UNK   79-UNK   88-UNK
                                   8-UNK   17-UNK   26-UNK   35-UNK   44-UNK   53-UNK   62-UNK   71-UNK   80-UNK   89-UNK

Chain w from PDB  Type:PROTEIN  Length:91
                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------- Transcript
                4ce4 w    1 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx   91
                            ||||||||10||||||||20||||||||30||||||||40||||||||50||||||||60||||||||70||||||||80||||||||90|
                            ||||||||9-UNK|||18-UNK|||27-UNK|||36-UNK|||45-UNK|||54-UNK|||63-UNK|||72-UNK|||81-UNK|||90-UNK
                            1-UNK|||10-UNK|||19-UNK|||28-UNK|||37-UNK|||46-UNK|||55-UNK|||64-UNK|||73-UNK|||82-UNK|||91-UNK
                             2-UNK|| 11-UNK|| 20-UNK|| 29-UNK|| 38-UNK|| 47-UNK|| 56-UNK|| 65-UNK|| 74-UNK|| 83-UNK||  
                              3-UNK|  12-UNK|  21-UNK|  30-UNK|  39-UNK|  48-UNK|  57-UNK|  66-UNK|  75-UNK|  84-UNK|  
                               4-UNK   13-UNK   22-UNK   31-UNK   40-UNK   49-UNK   58-UNK   67-UNK   76-UNK   85-UNK  
                                5-UNK   14-UNK   23-UNK   32-UNK   41-UNK   50-UNK   59-UNK   68-UNK   77-UNK   86-UNK 
                                 6-UNK   15-UNK   24-UNK   33-UNK   42-UNK   51-UNK   60-UNK   69-UNK   78-UNK   87-UNK
                                  7-UNK   16-UNK   25-UNK   34-UNK   43-UNK   52-UNK   61-UNK   70-UNK   79-UNK   88-UNK
                                   8-UNK   17-UNK   26-UNK   35-UNK   44-UNK   53-UNK   62-UNK   71-UNK   80-UNK   89-UNK

Chain x from PDB  Type:PROTEIN  Length:85
                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee......hhhhhhhhhhhhhhhhhhhh....eeee........eeeee....eeee.....hhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------- Transcript
                4ce4 x   15 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx   99
                            ||||||||24||||||||34||||||||44||||||||54||||||||64||||||||74||||||||84||||||||94|||||
                            |||||||23-UNK|||32-UNK|||41-UNK|||50-UNK|||59-UNK|||68-UNK|||77-UNK|||86-UNK|||95-UNK
                           15-UNK|||24-UNK|||33-UNK|||42-UNK|||51-UNK|||60-UNK|||69-UNK|||78-UNK|||87-UNK|||96-UNK
                            16-UNK|| 25-UNK|| 34-UNK|| 43-UNK|| 52-UNK|| 61-UNK|| 70-UNK|| 79-UNK|| 88-UNK|| 97-UNK
                             17-UNK|  26-UNK|  35-UNK|  44-UNK|  53-UNK|  62-UNK|  71-UNK|  80-UNK|  89-UNK|  98-UNK
                              18-UNK   27-UNK   36-UNK   45-UNK   54-UNK   63-UNK   72-UNK   81-UNK   90-UNK   99-UNK
                               19-UNK   28-UNK   37-UNK   46-UNK   55-UNK   64-UNK   73-UNK   82-UNK   91-UNK    
                                20-UNK   29-UNK   38-UNK   47-UNK   56-UNK   65-UNK   74-UNK   83-UNK   92-UNK   
                                 21-UNK   30-UNK   39-UNK   48-UNK   57-UNK   66-UNK   75-UNK   84-UNK   93-UNK  
                                  22-UNK   31-UNK   40-UNK   49-UNK   58-UNK   67-UNK   76-UNK   85-UNK   94-UNK 

Chain z from PDB  Type:PROTEIN  Length:426
                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4ce4 z  777 xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx 4109
                            |||||||786|||||||837||||||1003||||||1013||||||1023||||||1033||||||1043||||||1196||||||1206||||||1216||||||1302||||||1312||||||1322||||||1409||||||1419||||||1429||||||1439||||||1713||||||1799||||||1809||||||1820||||||1830||||||1840||||||1928||||||1938||||||1985||||||1995||||||2010||||||2020||||||2208||||||2218||||||2308||||||2318||||||2407||||||2604||||||2703||||||2713||||||3007||||||3017||||||3308||||||4001||||||4103||||||
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   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4CE4)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4CE4)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4CE4)

(-) Gene Ontology  (39, 162)

Asymmetric/Biological Unit(hide GO term definitions)
Chain 0   (F1RT79_PIG | F1RT79)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0005762    mitochondrial large ribosomal subunit    The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 2   (F1SGC7_PIG | F1SGC7)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0032543    mitochondrial translation    The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the mitochondrion has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005762    mitochondrial large ribosomal subunit    The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005761    mitochondrial ribosome    A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

Chain 3   (F1STE5_PIG | F1STE5)
cellular component
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

Chain 5   (I3LTC4_PIG | I3LTC4)
molecular function
    GO:0046872    metal ion binding    Interacting selectively and non-covalently with any metal ion.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005743    mitochondrial inner membrane    The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
    GO:0005762    mitochondrial large ribosomal subunit    The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

Chain 6   (I3LHI5_PIG | I3LHI5)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0005762    mitochondrial large ribosomal subunit    The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 7   (A0A0R4J8D6_P | A0A0R4J8D6)

Chain 7   (W5IDC1_PIG | W5IDC1)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 8   (F1SVC5_PIG | F1SVC5)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain 9   (I3LDE8_PIG | I3LDE8)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0042254    ribosome biogenesis    A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of ribosome subunits; includes transport to the sites of protein synthesis.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain D   (F1RRN2_PIG | F1RRN2)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
    GO:0016740    transferase activity    Catalysis of the transfer of a group, e.g. a methyl group, glycosyl group, acyl group, phosphorus-containing, or other groups, from one compound (generally regarded as the donor) to another compound (generally regarded as the acceptor). Transferase is the systematic name for any enzyme of EC class 2.
biological process
    GO:0002181    cytoplasmic translation    The chemical reactions and pathways resulting in the formation of a protein in the cytoplasm. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein.
    GO:0032543    mitochondrial translation    The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the mitochondrion has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005762    mitochondrial large ribosomal subunit    The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain F   (F1S3J8_PIG | F1S3J8)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0022626    cytosolic ribosome    A ribosome located in the cytosol.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain I   (I3LR45_PIG | I3LR45)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain N   (F1S286_PIG | F1S286)
molecular function
    GO:0003729    mRNA binding    Interacting selectively and non-covalently with messenger RNA (mRNA), an intermediate molecule between DNA and protein. mRNA includes UTR and coding sequences, but does not contain introns.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005762    mitochondrial large ribosomal subunit    The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005761    mitochondrial ribosome    A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain O   (F1RQV7_PIG | F1RQV7)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain P   (F1RSH0_PIG | F1RSH0)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005762    mitochondrial large ribosomal subunit    The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

Chain Q   (F1RI89_PIG | F1RI89)
molecular function
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0032543    mitochondrial translation    The chemical reactions and pathways resulting in the formation of a protein in a mitochondrion. This is a ribosome-mediated process in which the information in messenger RNA (mRNA) is used to specify the sequence of amino acids in the protein; the mitochondrion has its own ribosomes and transfer RNAs, and uses a genetic code that differs from the nuclear code.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005762    mitochondrial large ribosomal subunit    The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain R   (F1RMQ4_PIG | F1RMQ4)
molecular function
    GO:0019904    protein domain specific binding    Interacting selectively and non-covalently with a specific domain of a protein.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0000002    mitochondrial genome maintenance    The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005743    mitochondrial inner membrane    The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae.
    GO:0005762    mitochondrial large ribosomal subunit    The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain S   (A0A0R4J8D5_P | A0A0R4J8D5)

Chain T   (I3LNJ0_PIG | I3LNJ0)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0005762    mitochondrial large ribosomal subunit    The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0031965    nuclear membrane    Either of the lipid bilayers that surround the nucleus and form the nuclear envelope; excludes the intermembrane space.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain U   (F1RJD0_PIG | F1RJD0)
molecular function
    GO:0019843    rRNA binding    Interacting selectively and non-covalently with ribosomal RNA.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0000027    ribosomal large subunit assembly    The aggregation, arrangement and bonding together of constituent RNAs and proteins to form the large ribosomal subunit.
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005761    mitochondrial ribosome    A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain V   (F1RY70_PIG | F1RY70)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0005762    mitochondrial large ribosomal subunit    The larger of the two subunits of a mitochondrial ribosome. Two sites on the ribosomal large subunit are involved in translation: the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain W   (W5IDB8_PIG | W5IDB8)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0015934    large ribosomal subunit    The larger of the two subunits of a ribosome. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site).
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain X   (W5IDB9_PIG | W5IDB9)
molecular function
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain Y   (F1RHJ1_PIG | F1RHJ1)
molecular function
    GO:0003735    structural constituent of ribosome    The action of a molecule that contributes to the structural integrity of the ribosome.
biological process
    GO:0006412    translation    The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
    GO:0005622    intracellular    The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
    GO:0030529    intracellular ribonucleoprotein complex    An intracellular macromolecular complex containing both protein and RNA molecules.
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005840    ribosome    An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.

Chain b   (F1RW03_PIG | F1RW03)
cellular component
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

Chain c   (F1SHP6_PIG | F1SHP6)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0016876    ligase activity, forming aminoacyl-tRNA and related compounds    Catalysis of the joining of an amino acid and a nucleic acid (usually tRNA) or poly(ribitol phosphate), with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate. The reaction forms an aminoacyl-tRNA or a related compound.
    GO:0000166    nucleotide binding    Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
    GO:0004827    proline-tRNA ligase activity    Catalysis of the reaction: ATP + L-proline + tRNA(Pro) = AMP + diphosphate + L-prolyl-tRNA(Pro).
biological process
    GO:0000002    mitochondrial genome maintenance    The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome.
    GO:0006433    prolyl-tRNA aminoacylation    The process of coupling proline to prolyl-tRNA, catalyzed by prolyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.
    GO:0006418    tRNA aminoacylation for protein translation    The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
cellular component
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

Chain h   (F1SR64_PIG | F1SR64)
molecular function
    GO:0003723    RNA binding    Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
    GO:0003725    double-stranded RNA binding    Interacting selectively and non-covalently with double-stranded RNA.
    GO:0004525    ribonuclease III activity    Catalysis of the endonucleolytic cleavage of RNA with 5'-phosphomonoesters and 3'-OH termini; makes two staggered cuts in both strands of dsRNA, leaving a 3' overhang of 2 nt.
biological process
    GO:0090502    RNA phosphodiester bond hydrolysis, endonucleolytic    The chemical reactions and pathways involving the hydrolysis of internal 3',5'-phosphodiester bonds in one or two strands of ribonucleotides.
    GO:0006396    RNA processing    Any process involved in the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.
    GO:0070125    mitochondrial translational elongation    The successive addition of amino acid residues to a nascent polypeptide chain during protein biosynthesis in a mitochondrion.
    GO:0031054    pre-miRNA processing    Any process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule.
    GO:0031053    primary miRNA processing    Any process involved in the conversion of a primary microRNA transcript into a pre-microRNA molecule.
    GO:0030422    production of siRNA involved in RNA interference    Cleavage of double-stranded RNA to form small interfering RNA molecules (siRNAs) of 21-23 nucleotides, in the context of RNA interference.
cellular component
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.
    GO:0005634    nucleus    A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Chain i   (I3LGM5_PIG | I3LGM5)
cellular component
    GO:0005739    mitochondrion    A semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.

Chain u   (A0A140UHW4_P | A0A140UHW4)

Chain u   (W5IDC0_PIG | W5IDC0)
molecular function
    GO:0003747    translation release factor activity    Involved in catalyzing the release of a nascent polypeptide chain from a ribosome.
biological process
    GO:0006415    translational termination    The process resulting in the release of a polypeptide chain from the ribosome, usually in response to a termination codon (UAA, UAG, or UGA in the universal genetic code).

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A0A0R4J8D5_P | A0A0R4J8D54v19 4v1a 5aj4
        F1RHJ1_PIG | F1RHJ14v19 5aj4
        F1RI89_PIG | F1RI894v19 5aj4
        F1RJD0_PIG | F1RJD04v19 5aj4
        F1RMQ4_PIG | F1RMQ44v19 5aj4
        F1RQV7_PIG | F1RQV74v19 5aj4
        F1RRN2_PIG | F1RRN24v19 5aj4
        F1RSH0_PIG | F1RSH04v19 5aj4
        F1RT79_PIG | F1RT794v19 5aj4
        F1RW03_PIG | F1RW034v1a 5aj4
        F1RY70_PIG | F1RY704v19 5aj4
        F1S286_PIG | F1S2864v19 5aj4
        F1S3J8_PIG | F1S3J84v19 5aj4
        F1SGC7_PIG | F1SGC74v19
        F1SHP6_PIG | F1SHP64v1a
        F1SR64_PIG | F1SR644v1a 5aj4
        F1STE5_PIG | F1STE54v19 5aj4
        F1SVC5_PIG | F1SVC54v19 5aj4
        I3LDE8_PIG | I3LDE84v19 5aj4
        I3LNJ0_PIG | I3LNJ04v19 5aj4
        I3LR45_PIG | I3LR454v19 5aj4
        I3LTC4_PIG | I3LTC44v19 5aj4
        W5IDC0_PIG | W5IDC04v1a 5aj4
        W5IDC1_PIG | W5IDC14v19 5aj4

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4CE4)