Chain A from PDB Type:PROTEIN Length:171
aligned with Q3LG57_DANRE | Q3LG57 from UniProtKB/TrEMBL Length:302
Alignment length:171
141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301
Q3LG57_DANRE 132 ESGPDVAIIGDSIVRHVRAASSKGNKVRTFCFPGARVKNISTQIPTILGAAESPGAVVLHVGTNDTGLRQSEILKKDFRSLIETVRRTSPATQIIVSGPLPTYRRGNERFSRLLALNEWLITWCKEQKLLFANNWNLFWERPRLFRPDGLHPSRAGAELLSDNISRLLRTI 302
SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .....eeeee................eeeee.....hhhhhhhhhhhh.......eeeee.........hhhhhhhhhhhhhhhhhhh....eeeee.........hhhhhhhhhhhhhhhhhhhh...eee..hhhh...............hhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4c1b A 132 GPAMDVAIIGDSIVRHVRAASSKGNKVRTFCFPGARVKNISTQIPTILGAAESPGAVVLHVGTNDTGLRQSEILKKDFRSLIETVRRTSPATQIIVSGPLPTYRRGNERFSRLLALNEWLITWCKEQKLLFANNWNLFWERPRLFRPDGLHPSRAGAELLSDNISRLLRTI 302
141 151 161 171 181 191 201 211 221 231 241 251 261 271 281 291 301
Chain B from PDB Type:PROTEIN Length:168
aligned with Q3LG57_DANRE | Q3LG57 from UniProtKB/TrEMBL Length:302
Alignment length:168
144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294
Q3LG57_DANRE 135 PDVAIIGDSIVRHVRAASSKGNKVRTFCFPGARVKNISTQIPTILGAAESPGAVVLHVGTNDTGLRQSEILKKDFRSLIETVRRTSPATQIIVSGPLPTYRRGNERFSRLLALNEWLITWCKEQKLLFANNWNLFWERPRLFRPDGLHPSRAGAELLSDNISRLLRTI 302
SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
Sec.struct. author ..eeeee................eeeee.....hhhhhhhhhhh........eeeee..hhhh...hhhhhhhhhhhhhhhhhhh....eeeee.........hhhhhhhhhhhhhhhhhhhh...eee.hhhhh...............hhhhhhhhhhhhhhh... Sec.struct. author
SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
4c1b B 135 MDVAIIGDSIVRHVRAASSKGNKVRTFCFPGARVKNISTQIPTILGAAESPGAVVLHVGTNDTGLRQSEILKKDFRSLIETVRRTSPATQIIVSGPLPTYRRGNERFSRLLALNEWLITWCKEQKLLFANNWNLFWERPRLFRPDGLHPSRAGAELLSDNISRLLRTI 302
144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294
Chain C from PDB Type:PROTEIN Length:158
aligned with Q3LG57_DANRE | Q3LG57 from UniProtKB/TrEMBL Length:302
Alignment length:167
144 154 164 174 184 194 204 214 224 234 244 254 264 274 284 294
Q3LG57_DANRE 135 PDVAIIGDSIVRHVRAASSKGNKVRTFCFPGARVKNISTQIPTILGAAESPGAVVLHVGTNDTGLRQSEILKKDFRSLIETVRRTSPATQIIVSGPLPTYRRGNERFSRLLALNEWLITWCKEQKLLFANNWNLFWERPRLFRPDGLHPSRAGAELLSDNISRLLRT 301
SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
Sec.struct. author .eeeeee.........-----.eeeeee.....hhhhhh.hhhh.----...eeeee.........hhhhhhhhhhhhhhhhhhh......eee.........hhhhhhhhhhhhhhhhhhhh...eee..hhhh...............hhhhhhhhhhhhhhhh. Sec.struct. author
SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
4c1b C 135 MDVAIIGDSIVRHVRA-----NKVRTFCFPGARVKNISTQIPTIL----SPGAVVLHVGTNDTGLRQSEILKKDFRSLIETVRRTSPATQIIVSGPLPTYRRGNERFSRLLALNEWLITWCKEQKLLFANNWNLFWERPRLFRPDGLHPSRAGAELLSDNISRLLRT 301
144 | - | 164 174 | 184 194 204 214 224 234 244 254 264 274 284 294
150 156 179 184
Legend: |
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→ Mismatch |
(orange background) |
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- |
→ Gap |
(green background, '-', border residues have a numbering label) |
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→ Modified Residue |
(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name) |
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x |
→ Chemical Group |
(purple background, 'x', labelled with number + name, e.g. ACE or NH2) |
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extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|' |