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(-) Description

Title :  CRYSTAL STRUCTURE OF IN PLANTA PROCESSED AVRRPS4
 
Authors :  K. H. Sohn, R. K. Hughes, S. J. Piquerez, J. D. G. Jones, M. J. Banfield
Date :  15 Aug 12  (Deposition) - 19 Sep 12  (Release) - 31 Oct 12  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Toxin, Type 3 Secreted Effector (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. H. Sohn, R. K. Hughes, S. J. Piquerez, J. D. G. Jones, M. J. Banfield
Distinct Regions Of The Pseudomonas Syringae Coiled-Coil Effector Avrrps4 Are Required For Activation Of Immunity.
Proc. Natl. Acad. Sci. Usa V. 109 16371 2012
PubMed-ID: 22988101  |  Reference-DOI: 10.1073/PNAS.1212332109

(-) Compounds

Molecule 1 - AVIRULENCE PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: POPIN-F
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: IN-PLANTA PROCESSED C-TERMINAL DOMAIN, RESIDUES 134-220
    Organism Scientific: PSEUDOMONAS SYRINGAE PV. PISI
    Organism Taxid: 59510
    Synonym: AVRRPS4

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1ACT-1Ligand/IonACETATE ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG B:159 , GLU B:163BINDING SITE FOR RESIDUE ACT B1214

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4B6X)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:69
 aligned with Q52432_PSESX | Q52432 from UniProtKB/TrEMBL  Length:220

    Alignment length:69
                                                                                             220 
                                   162       172       182       192       202       212       | 
         Q52432_PSESX   153 GAGAALRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRRFAVLRNEDRRIN-   -
               SCOP domains --------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------- Transcript
                 4b6x A 153 GAGAALRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRRFAVLRNEDRRINQ 221
                                   162       172       182       192       202       212         


Chain B from PDB  Type:PROTEIN  Length:58
 aligned with Q52432_PSESX | Q52432 from UniProtKB/TrEMBL  Length:220

    Alignment length:58
                                   165       175       185       195       205        
         Q52432_PSESX   156 AALRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRRFAVLR 213
               SCOP domains ---------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------- Transcript
                 4b6x B 156 AALRQEIEDKQLMVNNLTDELQDAIDEANPAEIANTSQQLRHARADLADLQRRFAVLR 213
                                   165       175       185       195       205
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4B6X)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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