4B3G - JenaLib

Asymmetric Unit (35, 70)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_058497	L	17	P	SMBP2_HUMAN	Disease (HMN6)	---	A/B	L	17	P
02	UniProt	VAR_055225	A	75	T	SMBP2_HUMAN	Polymorphism	2228206	A/B	A	75	T
03	UniProt	VAR_022321	L	192	P	SMBP2_HUMAN	Disease (HMN6)	---	A/B	L	192	P
04	UniProt	VAR_058498	Q	196	R	SMBP2_HUMAN	Disease (HMN6)	---	A/B	Q	196	R
05	UniProt	VAR_024242	L	201	S	SMBP2_HUMAN	Polymorphism	560096	A/B	L	201	S
06	UniProt	VAR_072694	F	202	V	SMBP2_HUMAN	Disease (CMT2S)	724159958	A/B	F	202	V
07	UniProt	VAR_022322	H	213	R	SMBP2_HUMAN	Disease (HMN6)	137852666	A/B	H	213	R
08	UniProt	VAR_058499	P	216	L	SMBP2_HUMAN	Disease (HMN6)	---	A/B	P	216	L
09	UniProt	VAR_022323	T	221	A	SMBP2_HUMAN	Disease (HMN6)	---	A/B	T	221	A
10	UniProt	VAR_022324	C	241	R	SMBP2_HUMAN	Disease (HMN6)	---	A/B	C	241	R
11	UniProt	VAR_058500	L	251	P	SMBP2_HUMAN	Disease (HMN6)	---	A/B	L	251	P
12	UniProt	VAR_024243	I	275	V	SMBP2_HUMAN	Polymorphism	10896380	A/B	I	275	V
13	UniProt	VAR_022325	E	334	K	SMBP2_HUMAN	Disease (HMN6)	---	A/B	E	334	K
14	UniProt	VAR_022326	L	361	P	SMBP2_HUMAN	Disease (HMN6)	201060167	A/B	L	361	P
15	UniProt	VAR_022327	L	364	P	SMBP2_HUMAN	Disease (HMN6)	---	A/B	L	364	P
16	UniProt	VAR_072695	F	369	L	SMBP2_HUMAN	Disease (HMN6)	137852670	A/B	F	369	L
17	UniProt	VAR_072696	V	373	G	SMBP2_HUMAN	Disease (CMT2S)	724159959	A/B	V	373	G
18	UniProt	VAR_022328	E	382	K	SMBP2_HUMAN	Disease (HMN6)	---	A/B	E	382	K
19	UniProt	VAR_058501	W	386	R	SMBP2_HUMAN	Disease (HMN6)	759641927	A/B	W	386	R
20	UniProt	VAR_022329	L	426	P	SMBP2_HUMAN	Disease (HMN6)	---	A/B	L	426	P
21	UniProt	VAR_058502	H	445	P	SMBP2_HUMAN	Disease (HMN6)	571142182	A/B	H	445	P
22	UniProt	VAR_058503	L	472	P	SMBP2_HUMAN	Disease (HMN6)	---	A/B	L	472	P
23	UniProt	VAR_058504	T	493	I	SMBP2_HUMAN	Disease (HMN6)	780594709	A/B	T	493	I
24	UniProt	VAR_022330	E	514	K	SMBP2_HUMAN	Disease (HMN6)	137852665	A/B	E	514	K
25	UniProt	VAR_072697	A	528	T	SMBP2_HUMAN	Disease (CMT2S)	724159960	A/B	A	528	T
26	UniProt	VAR_055226	P	557	A	SMBP2_HUMAN	Polymorphism	7122089	A/B	P	557	A
27	UniProt	VAR_022331	D	565	N	SMBP2_HUMAN	Disease (HMN6)	770111639	A/B	D	565	N
28	UniProt	VAR_022333	L	577	P	SMBP2_HUMAN	Disease (HMN6)	---	A/B	L	577	P
29	UniProt	VAR_022334	V	580	I	SMBP2_HUMAN	Disease (HMN6)	137852667	A/B	V	580	I
30	UniProt	VAR_058505	R	581	S	SMBP2_HUMAN	Disease (HMN6)	---	A/B	R	581	S
31	UniProt	VAR_022335	N	583	I	SMBP2_HUMAN	Disease (HMN6)	---	A/B	N	583	I
32	UniProt	VAR_022336	G	586	C	SMBP2_HUMAN	Disease (HMN6)	---	A/B	G	586	C
33	UniProt	VAR_058506	R	603	C	SMBP2_HUMAN	Disease (HMN6)	---	A/B	R	603	C
34	UniProt	VAR_022337	R	603	H	SMBP2_HUMAN	Disease (HMN6)	151079750	A/B	R	603	H
35	UniProt	VAR_022338	R	637	C	SMBP2_HUMAN	Disease (HMN6)	201563456	A/B	R	637	C

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 1 (35, 35)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_058497	L	17	P	SMBP2_HUMAN	Disease (HMN6)	---	A	L	17	P
02	UniProt	VAR_055225	A	75	T	SMBP2_HUMAN	Polymorphism	2228206	A	A	75	T
03	UniProt	VAR_022321	L	192	P	SMBP2_HUMAN	Disease (HMN6)	---	A	L	192	P
04	UniProt	VAR_058498	Q	196	R	SMBP2_HUMAN	Disease (HMN6)	---	A	Q	196	R
05	UniProt	VAR_024242	L	201	S	SMBP2_HUMAN	Polymorphism	560096	A	L	201	S
06	UniProt	VAR_072694	F	202	V	SMBP2_HUMAN	Disease (CMT2S)	724159958	A	F	202	V
07	UniProt	VAR_022322	H	213	R	SMBP2_HUMAN	Disease (HMN6)	137852666	A	H	213	R
08	UniProt	VAR_058499	P	216	L	SMBP2_HUMAN	Disease (HMN6)	---	A	P	216	L
09	UniProt	VAR_022323	T	221	A	SMBP2_HUMAN	Disease (HMN6)	---	A	T	221	A
10	UniProt	VAR_022324	C	241	R	SMBP2_HUMAN	Disease (HMN6)	---	A	C	241	R
11	UniProt	VAR_058500	L	251	P	SMBP2_HUMAN	Disease (HMN6)	---	A	L	251	P
12	UniProt	VAR_024243	I	275	V	SMBP2_HUMAN	Polymorphism	10896380	A	I	275	V
13	UniProt	VAR_022325	E	334	K	SMBP2_HUMAN	Disease (HMN6)	---	A	E	334	K
14	UniProt	VAR_022326	L	361	P	SMBP2_HUMAN	Disease (HMN6)	201060167	A	L	361	P
15	UniProt	VAR_022327	L	364	P	SMBP2_HUMAN	Disease (HMN6)	---	A	L	364	P
16	UniProt	VAR_072695	F	369	L	SMBP2_HUMAN	Disease (HMN6)	137852670	A	F	369	L
17	UniProt	VAR_072696	V	373	G	SMBP2_HUMAN	Disease (CMT2S)	724159959	A	V	373	G
18	UniProt	VAR_022328	E	382	K	SMBP2_HUMAN	Disease (HMN6)	---	A	E	382	K
19	UniProt	VAR_058501	W	386	R	SMBP2_HUMAN	Disease (HMN6)	759641927	A	W	386	R
20	UniProt	VAR_022329	L	426	P	SMBP2_HUMAN	Disease (HMN6)	---	A	L	426	P
21	UniProt	VAR_058502	H	445	P	SMBP2_HUMAN	Disease (HMN6)	571142182	A	H	445	P
22	UniProt	VAR_058503	L	472	P	SMBP2_HUMAN	Disease (HMN6)	---	A	L	472	P
23	UniProt	VAR_058504	T	493	I	SMBP2_HUMAN	Disease (HMN6)	780594709	A	T	493	I
24	UniProt	VAR_022330	E	514	K	SMBP2_HUMAN	Disease (HMN6)	137852665	A	E	514	K
25	UniProt	VAR_072697	A	528	T	SMBP2_HUMAN	Disease (CMT2S)	724159960	A	A	528	T
26	UniProt	VAR_055226	P	557	A	SMBP2_HUMAN	Polymorphism	7122089	A	P	557	A
27	UniProt	VAR_022331	D	565	N	SMBP2_HUMAN	Disease (HMN6)	770111639	A	D	565	N
28	UniProt	VAR_022333	L	577	P	SMBP2_HUMAN	Disease (HMN6)	---	A	L	577	P
29	UniProt	VAR_022334	V	580	I	SMBP2_HUMAN	Disease (HMN6)	137852667	A	V	580	I
30	UniProt	VAR_058505	R	581	S	SMBP2_HUMAN	Disease (HMN6)	---	A	R	581	S
31	UniProt	VAR_022335	N	583	I	SMBP2_HUMAN	Disease (HMN6)	---	A	N	583	I
32	UniProt	VAR_022336	G	586	C	SMBP2_HUMAN	Disease (HMN6)	---	A	G	586	C
33	UniProt	VAR_058506	R	603	C	SMBP2_HUMAN	Disease (HMN6)	---	A	R	603	C
34	UniProt	VAR_022337	R	603	H	SMBP2_HUMAN	Disease (HMN6)	151079750	A	R	603	H
35	UniProt	VAR_022338	R	637	C	SMBP2_HUMAN	Disease (HMN6)	201563456	A	R	637	C

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

Biological Unit 2 (35, 35)

								dbSNP	PDB
No.	Source	Variant ID	Variant			UniProt ID	Status	ID	Chain	Variant
01	UniProt	VAR_058497	L	17	P	SMBP2_HUMAN	Disease (HMN6)	---	B	L	17	P
02	UniProt	VAR_055225	A	75	T	SMBP2_HUMAN	Polymorphism	2228206	B	A	75	T
03	UniProt	VAR_022321	L	192	P	SMBP2_HUMAN	Disease (HMN6)	---	B	L	192	P
04	UniProt	VAR_058498	Q	196	R	SMBP2_HUMAN	Disease (HMN6)	---	B	Q	196	R
05	UniProt	VAR_024242	L	201	S	SMBP2_HUMAN	Polymorphism	560096	B	L	201	S
06	UniProt	VAR_072694	F	202	V	SMBP2_HUMAN	Disease (CMT2S)	724159958	B	F	202	V
07	UniProt	VAR_022322	H	213	R	SMBP2_HUMAN	Disease (HMN6)	137852666	B	H	213	R
08	UniProt	VAR_058499	P	216	L	SMBP2_HUMAN	Disease (HMN6)	---	B	P	216	L
09	UniProt	VAR_022323	T	221	A	SMBP2_HUMAN	Disease (HMN6)	---	B	T	221	A
10	UniProt	VAR_022324	C	241	R	SMBP2_HUMAN	Disease (HMN6)	---	B	C	241	R
11	UniProt	VAR_058500	L	251	P	SMBP2_HUMAN	Disease (HMN6)	---	B	L	251	P
12	UniProt	VAR_024243	I	275	V	SMBP2_HUMAN	Polymorphism	10896380	B	I	275	V
13	UniProt	VAR_022325	E	334	K	SMBP2_HUMAN	Disease (HMN6)	---	B	E	334	K
14	UniProt	VAR_022326	L	361	P	SMBP2_HUMAN	Disease (HMN6)	201060167	B	L	361	P
15	UniProt	VAR_022327	L	364	P	SMBP2_HUMAN	Disease (HMN6)	---	B	L	364	P
16	UniProt	VAR_072695	F	369	L	SMBP2_HUMAN	Disease (HMN6)	137852670	B	F	369	L
17	UniProt	VAR_072696	V	373	G	SMBP2_HUMAN	Disease (CMT2S)	724159959	B	V	373	G
18	UniProt	VAR_022328	E	382	K	SMBP2_HUMAN	Disease (HMN6)	---	B	E	382	K
19	UniProt	VAR_058501	W	386	R	SMBP2_HUMAN	Disease (HMN6)	759641927	B	W	386	R
20	UniProt	VAR_022329	L	426	P	SMBP2_HUMAN	Disease (HMN6)	---	B	L	426	P
21	UniProt	VAR_058502	H	445	P	SMBP2_HUMAN	Disease (HMN6)	571142182	B	H	445	P
22	UniProt	VAR_058503	L	472	P	SMBP2_HUMAN	Disease (HMN6)	---	B	L	472	P
23	UniProt	VAR_058504	T	493	I	SMBP2_HUMAN	Disease (HMN6)	780594709	B	T	493	I
24	UniProt	VAR_022330	E	514	K	SMBP2_HUMAN	Disease (HMN6)	137852665	B	E	514	K
25	UniProt	VAR_072697	A	528	T	SMBP2_HUMAN	Disease (CMT2S)	724159960	B	A	528	T
26	UniProt	VAR_055226	P	557	A	SMBP2_HUMAN	Polymorphism	7122089	B	P	557	A
27	UniProt	VAR_022331	D	565	N	SMBP2_HUMAN	Disease (HMN6)	770111639	B	D	565	N
28	UniProt	VAR_022333	L	577	P	SMBP2_HUMAN	Disease (HMN6)	---	B	L	577	P
29	UniProt	VAR_022334	V	580	I	SMBP2_HUMAN	Disease (HMN6)	137852667	B	V	580	I
30	UniProt	VAR_058505	R	581	S	SMBP2_HUMAN	Disease (HMN6)	---	B	R	581	S
31	UniProt	VAR_022335	N	583	I	SMBP2_HUMAN	Disease (HMN6)	---	B	N	583	I
32	UniProt	VAR_022336	G	586	C	SMBP2_HUMAN	Disease (HMN6)	---	B	G	586	C
33	UniProt	VAR_058506	R	603	C	SMBP2_HUMAN	Disease (HMN6)	---	B	R	603	C
34	UniProt	VAR_022337	R	603	H	SMBP2_HUMAN	Disease (HMN6)	151079750	B	R	603	H
35	UniProt	VAR_022338	R	637	C	SMBP2_HUMAN	Disease (HMN6)	201563456	B	R	637	C

SNP/SAP Summary Statistics (UniProtKB/Swiss-Prot)

PROSITE Motifs (0, 0)

Exons (13, 26)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:614
 aligned with SMBP2_HUMAN | P38935 from UniProtKB/Swiss-Prot  Length:993

    Alignment length:645
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563       573       583       593       603       613       623       633       643     
          SMBP2_HUMAN     4 AAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYGRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAPSPASEIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDDIVP 648
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhh.-----.........eeeeeeeeeeeee...eeeeeee...................ee....----......eeeee......eeee..----.........eeee....hhhhhhhhhhhhhhhh.....hhhhhhhh......................hhhhhhhhhhhhh...eeeee.....hhhhhhhhhhhhhhhh...eeeee.hhhhhhhhhhhhhhh...eee.......hhhhhhhhhhhhhhh..hhhhhhhhhhhhh......-------------..hhhhhhhhhhhhhhhhhhhhhh..eeeee.hhhh..hhhhhh......eeee.hhhhhhhhhhhhhhh...eeeeee..........hhhhhhhh...hhhhhhhhhhh...eee..ee...hhhhhhhhhhhhh....ee.......hhhhh............eeeee.........-----....hhhhhhhhhhhhhhhhhh..hhh.eeeee.hhhhhhhhhhh........eeee........eeeeeee..............hhhhhhhhhh.eeeeeeeeehhhhhh.hhhhhhhhhhhhhh.eeeehhhhh..... Sec.struct. author
             SAPs(SNPs) (1) -------------P---------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------P---R----SV----------R--L----A-------------------R---------P-----------------------V----------------------------------------------------------K--------------------------P--P----L---G--------K---R---------------------------------------P------------------P--------------------------P--------------------I--------------------K-------------T----------------------------A-------N-----------P--IS-I--C----------------C---------------------------------C----------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------H--------------------------------------------- SAPs(SNPs) (2)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: A:4-29     --------------------------------------------------------Exon 1.3  PDB: A:86-150 (gaps) UniProt: 86-150                   --------------------------------Exon 1.5  PDB: A:183-237 UniProt: 183-237              Exon 1.6  PDB: A:238-304 UniProt: 238-304                          Exon 1.7  PDB: A:305-354 (gaps) UniProt: 305-354  ----------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: A:473-513 (gaps)         -------------------------------Exon 1.12  PDB: A:545-586 UniProt: 545-586-------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) -------------------------Exon 1.2  PDB: A:29-86 (gaps) UniProt: 29-86              ---------------------------------------------------------------Exon 1.4  PDB: A:150-183          --------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: A:354-412 UniProt: 354-412                  ----------------------------------------------------------------------------------------------------Exon 1.11  PDB: A:513-544       -----------------------------------------Exon 1.13  PDB: A:586-648 UniProt: 586-871 [INCOMPLETE]         Transcript 1 (2)
           Transcript 1 (3) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: A:412-473 UniProt: 412-473                     ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3)
                 4b3g A   4 AAVESFVTKQLDLLELERDAEVEERRSW-----LKELQSRGVCLLKLQVSSQRTGLYGRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYD----GSQLATGILTRVTQKSVTVAFDE----QQSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAPSPASEIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVFVKN-------------NEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFEL-----QSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDDIVP 648
                                    13        23       | -   |    43        53        63        73        83        93    |  103       113      |  - |     133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293       303   |     -       323       333       343       353       363       373       383       393       403       413       423       433       443       453       463       473       483       493       | -   |   513       523       533       543       553       563       573       583       593       603       613       623       633       643     
                                                      31    37                                                      93   98                   120  125                                                                                                                                                                                   307           321                                                                                                                                                                                 501   507

Chain B from PDB  Type:PROTEIN  Length:608
 aligned with SMBP2_HUMAN | P38935 from UniProtKB/Swiss-Prot  Length:993

    Alignment length:646
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642      
          SMBP2_HUMAN     3 SAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYGRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAPSPASEIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDDIVP 648
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhh.....-----.........eeeeeeeee........eeeeeeeee................eeeee.-------..eeeeeee....eeeee.--------......eeeee....hhhhhhhhhhhhhhh.....hhhhhhhh......................hhhhhhhhhhhhhh..eeeee......hhhhhhhhhhhhhhh...eeeee.hhhhhhhhhhhhhhh...eee..hhhhh...hhhhhhhhhhh.....hhhhhhhhhhh..----------------hhhhhhhhhhhhhhhhhhhhhhhhhh.eeeee.hhh...hhhhhh....eeeeee......hhhhhh.hhh.eeeeeeee..........hhhhhhhh...hhhhhhhhhhh...eee..ee...hhhhhhhhhhhhh....eehhhhhh.hhhhh............eeeee........ee..--..eehhhhhhhhhhhhhhhhhh..hhh.eeeee.hhhhhhhhhhhhh......eeee.hhhh...eeeeeee..............hhhhhhhhhh.eeeeeeeeehhhhhh.hhhhhhhhhhhhhhheeee.hhh...... Sec.struct. author
             SAPs(SNPs) (1) --------------P---------------------------------------------------------T--------------------------------------------------------------------------------------------------------------------P---R----SV----------R--L----A-------------------R---------P-----------------------V----------------------------------------------------------K--------------------------P--P----L---G--------K---R---------------------------------------P------------------P--------------------------P--------------------I--------------------K-------------T----------------------------A-------N-----------P--IS-I--C----------------C---------------------------------C----------- SAPs(SNPs) (1)
             SAPs(SNPs) (2) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------H--------------------------------------------- SAPs(SNPs) (2)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
           Transcript 1 (1) Exon 1.1  PDB: B:3-29      --------------------------------------------------------Exon 1.3  PDB: B:86-150 (gaps) UniProt: 86-150                   --------------------------------Exon 1.5  PDB: B:183-237 UniProt: 183-237              Exon 1.6  PDB: B:238-303 UniProt: 238-304 [INCOMPLETE]             Exon 1.7  PDB: B:320-354 UniProt: 305-354         ----------------------------------------------------------------------------------------------------------------------Exon 1.10  PDB: B:473-513 (gaps)         -------------------------------Exon 1.12  PDB: B:545-586 UniProt: 545-586-------------------------------------------------------------- Transcript 1 (1)
           Transcript 1 (2) --------------------------Exon 1.2  PDB: B:29-86 (gaps) UniProt: 29-86              ---------------------------------------------------------------Exon 1.4  PDB: B:150-183          --------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.8  PDB: B:354-412 UniProt: 354-412                  ----------------------------------------------------------------------------------------------------Exon 1.11  PDB: B:513-544       -----------------------------------------Exon 1.13  PDB: B:586-648 UniProt: 586-871 [INCOMPLETE]         Transcript 1 (2)
           Transcript 1 (3) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Exon 1.9  PDB: B:412-473 UniProt: 412-473                     ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript 1 (3)
                 4b3g B   3 SAAVESFVTKQLDLLELERDAEVEERRSW-----LKELQSRGVCLLKLQVSSQRTGLYGRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYD-------LATGILTRVTQKSVTVAFD--------LDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAPSPASEIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHSLDAVLARSDSAQIVADIRKDIDQV----------------RNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEE--QSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLKTLVEYFTQHGEVRTAFEYLDDIVP 648
                                    12        22        |-    |   42        52        62        72        82        92|      102       112      |  -     | 132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302|        -       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502 |  |  512       522       532       542       552       562       572       582       592       602       612       622       632       642      
                                                       31    37                                                      93     101               119      128                                                                                                                                                                            303              320                                                                                                                                                                                     504  |                                                                                                                                             
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  507

Chain G from PDB  Type:RNA  Length:9
                                         
                 4b3g G   1 AAAAAAAAA   9

Chain H from PDB  Type:RNA  Length:8
                                        
                 4b3g H   2 AAAAAAAA   9

Legend:		→ Mismatch	(orange background)
	-	→ Gap	(green background, '-', border residues have a numbering label)
		→ Modified Residue	(blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (37, 37)

Asymmetric Unit(hide GO term definitions)

Chain A,B (SMBP2_HUMAN | P38935)

molecular function
	GO:0005524	ATP binding	Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
	GO:0043141	ATP-dependent 5'-3' DNA helicase activity	Catalysis of the reaction: ATP + H2O = ADP + phosphate; drives the unwinding of the DNA helix in the direction 5' to 3'.
	GO:0032575	ATP-dependent 5'-3' RNA helicase activity	Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction drives the unwinding of an RNA helix in the direction 5' to 3'.
	GO:0008026	ATP-dependent helicase activity	Catalysis of the reaction: ATP + H2O = ADP + phosphate, to drive the unwinding of a DNA or RNA helix.
	GO:0003677	DNA binding	Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
	GO:0003678	DNA helicase activity	Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA helix.
	GO:0008094	DNA-dependent ATPase activity	Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of single- or double-stranded DNA, and it drives another reaction.
	GO:0003723	RNA binding	Interacting selectively and non-covalently with an RNA molecule or a portion thereof.
	GO:0008186	RNA-dependent ATPase activity	Catalysis of the reaction: ATP + H2O = ADP + phosphate; this reaction requires the presence of RNA, and it drives another reaction.
	GO:0004386	helicase activity	Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA or RNA helix.
	GO:0016787	hydrolase activity	Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3.
	GO:0046872	metal ion binding	Interacting selectively and non-covalently with any metal ion.
	GO:0003676	nucleic acid binding	Interacting selectively and non-covalently with any nucleic acid.
	GO:0000166	nucleotide binding	Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
	GO:0005515	protein binding	Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
	GO:0043022	ribosome binding	Interacting selectively and non-covalently with any part of a ribosome.
	GO:0003697	single-stranded DNA binding	Interacting selectively and non-covalently with single-stranded DNA.
	GO:0000049	tRNA binding	Interacting selectively and non-covalently with transfer RNA.
	GO:0008134	transcription factor binding	Interacting selectively and non-covalently with a transcription factor, any protein required to initiate or regulate transcription.
	GO:0008270	zinc ion binding	Interacting selectively and non-covalently with zinc (Zn) ions.
biological process
	GO:0032508	DNA duplex unwinding	The process in which interchain hydrogen bonds between two strands of DNA are broken or 'melted', generating a region of unpaired single strands.
	GO:0006310	DNA recombination	Any process in which a new genotype is formed by reassortment of genes resulting in gene combinations different from those that were present in the parents. In eukaryotes genetic recombination can occur by chromosome assortment, intrachromosomal recombination, or nonreciprocal interchromosomal recombination. Intrachromosomal recombination occurs by crossing over. In bacteria it may occur by genetic transformation, conjugation, transduction, or F-duction.
	GO:0006281	DNA repair	The process of restoring DNA after damage. Genomes are subject to damage by chemical and physical agents in the environment (e.g. UV and ionizing radiations, chemical mutagens, fungal and bacterial toxins, etc.) and by free radicals or alkylating agents endogenously generated in metabolism. DNA is also damaged because of errors during its replication. A variety of different DNA repair pathways have been reported that include direct reversal, base excision repair, nucleotide excision repair, photoreactivation, bypass, double-strand break repair pathway, and mismatch repair pathway.
	GO:0006260	DNA replication	The cellular metabolic process in which a cell duplicates one or more molecules of DNA. DNA replication begins when specific sequences, known as origins of replication, are recognized and bound by initiation proteins, and ends when the original DNA molecule has been completely duplicated and the copies topologically separated. The unit of replication usually corresponds to the genome of the cell, an organelle, or a virus. The template for replication can either be an existing DNA molecule or RNA.
	GO:0051260	protein homooligomerization	The process of creating protein oligomers, compounds composed of a small number, usually between three and ten, of identical component monomers. Oligomers may be formed by the polymerization of a number of monomers or the depolymerization of a large protein polymer.
	GO:0006357	regulation of transcription from RNA polymerase II promoter	Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter.
	GO:0006355	regulation of transcription, DNA-templated	Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
	GO:0006351	transcription, DNA-templated	The cellular synthesis of RNA on a template of DNA.
	GO:0006412	translation	The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA or circRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA or circRNA. Translation ends with the release of a polypeptide chain from the ribosome.
cellular component
	GO:0032797	SMN complex	A protein complex that contains the survival motor neuron (SMN) protein and at least eight additional integral components, including the Gemin2-8 and Unrip proteins; the complex is found in the cytoplasm and in nuclear Gems, and is involved in spliceosomal snRNP assembly in the cytoplasm and in pre-mRNA splicing in the nucleus.
	GO:0030424	axon	The long process of a neuron that conducts nerve impulses, usually away from the cell body to the terminals and varicosities, which are sites of storage and release of neurotransmitter.
	GO:0042995	cell projection	A prolongation or process extending from a cell, e.g. a flagellum or axon.
	GO:0005737	cytoplasm	All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
	GO:0030426	growth cone	The migrating motile tip of a growing nerve cell axon or dendrite.
	GO:0030529	intracellular ribonucleoprotein complex	An intracellular macromolecular complex containing both protein and RNA molecules.
	GO:0016020	membrane	A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
	GO:0005634	nucleus	A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.

Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (0, 0)

Sites (0, 0)

SS Bonds (0, 0)

Cis Peptide Bonds (14, 14)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (35, 70)

PROSITE Motifs (0, 0)

Exons (13, 26)

Sequences/Alignments

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (37, 37)

Visualization

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Databases and Analysis Tools

Databases

Analysis Tools

Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File