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(-) Description

Title :  THERMOSTABLE ENOLASE FROM CHLOROFLEXUS AURANTIACUS
 
Authors :  O. A. Zadvornyy, J. W. Peters
Date :  26 Mar 15  (Deposition) - 01 Jul 15  (Release) - 01 Jul 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.65
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Enolase, Thermostability, Thermophilic Origin, Phylogeny, Lyase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  O. A. Zadvornyy, E. S. Boyd, M. C. Posewitz, N. A. Zorin, J. W. Peters
Biochemical And Structural Characterization Of Enolase From Chloroflexus Aurantiacus: Evidence For A Thermophilic Origin.
Front Bioeng Biotechnol V. 3 74 2015
PubMed-ID: 26082925  |  Reference-DOI: 10.3389/FBIOE.2015.00074

(-) Compounds

Molecule 1 - ENOLASE
    Atcc: 29366
    Chains: A, B
    EC Number: 4.2.1.11
    Organism Scientific: CHLOROFLEXUS AURANTIACUS (STRAIN ATCC 29366 / DSM 635 / J-10-FL)
    Organism Taxid: 324602
    Strain: ATCC 29366 / DSM 635 / J-10-FL
    Synonym: 2-PHOSPHO-D-GLYCERATE HYDRO-LYASE,2-PHOSPHOGLYCERATE DEHYDRATASE

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 6)

Asymmetric/Biological Unit (2, 6)
No.NameCountTypeFull Name
1MG4Ligand/IonMAGNESIUM ION
2PEP2Ligand/IonPHOSPHOENOLPYRUVATE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:243 , GLU A:286 , ASP A:287 , ASP A:313 , PEP A:502 , MG A:503binding site for residue MG A 501
2AC2SOFTWARESER A:40 , GLY A:41 , ALA A:42 , GLU A:165 , ASP A:243 , GLU A:286 , ASP A:313 , LEU A:336 , LYS A:338 , ARG A:367 , SER A:368 , LYS A:389 , MG A:501 , MG A:503binding site for residue PEP A 502
3AC3SOFTWAREASP A:313 , ASP A:314 , MG A:501 , PEP A:502binding site for residue MG A 503
4AC4SOFTWAREASP B:243 , GLU B:286 , ASP B:313 , PEP B:502 , MG B:503binding site for residue MG B 501
5AC5SOFTWAREGLY B:41 , SER B:43 , GLU B:165 , ASP B:313 , LYS B:338 , SER B:365 , ARG B:367 , SER B:368 , LYS B:389 , MG B:501 , MG B:503binding site for residue PEP B 502
6AC6SOFTWARESER B:43 , MG B:501 , PEP B:502binding site for residue MG B 503

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4Z17)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Ser A:160 -Thr A:161
2Gly B:45 -Ala B:46
3Gly B:204 -Asp B:205
4Asp B:252 -Gly B:253
5Lys B:258 -Arg B:259
6Leu B:264 -Ser B:265

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Z17)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Z17)

(-) Exons   (0, 0)

(no "Exon" information available for 4Z17)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:424
                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeeeeeee.....eeeeeeeee....eeeee.....................hhhhh.hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh.ee.ee.eeeee..........eeeee.....hhhhhhhhhhhhhhhhhhhhhh....................hhhhhhhhhhhhh.........eeeee.hhhhh...............hhhhhhhhhhhhhhhh.eeeee......hhhhhhhhhhhhh...eeee......hhhhhhhhhhhh...eeeehhhhhhhhhhhhhhhhhhhhh..eeeee........hhhhhhhhhh...eee.....hhhhhhhhhhhhhhhhhhhhhhee.hhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4z17 A   1 MSTLIEAIVAREVLDSRGNPTIEVDVRLESGDVGRAIVPSGASTGAHEALELRDGDKSRYNGKGVLKAVQAVNEDIAEALIGFDAADQIALDQELIALDGTPNKSKLGANAILGVSLAAAKAAAAAFGLPLYRYLGGVYAHVLPVPMMNIMNGGQHNSTDFQEFMIMPVGAESFREGLRWGAEIYHMLKKVIHDRGFSTTVGDEGGFAPSLPTNDAPLQLIMEAIEKAGYRPGEQIVIALDPATTEIFEDGKYHLKREGRSLSSAEMVDYWVDLVNRYPIISLEDGLAEDDWEGWALLRAKLGDRVQLVGDDFLVTNVQRLQRAIEAKAANSILIKLNQIGSLTETLSAIQLAQRSGWTAVVSHRSGESEDVTIADLVVATNAGQIKTGAPARTDRIAKYNQLLRIEEELGSAARYAGRSAFKV 426
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150     ||162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422    
                                                                                                                                                                                     156|                                                                                                                                                                                                                                                                           
                                                                                                                                                                                      159                                                                                                                                                                                                                                                                           


Chain B from PDB  Type:PROTEIN  Length:420
                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeeeeeee.....eeeeeeeee....eeeeee....................hhhhh.hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.hhhhhhhh....ee.ee.eeee........eeeee.....hhhhhhhhhhhhhhhhhhhhhhh...................hhhhhhhhhhhhhh........eeeee.....................hhhhhhhhhhhhhhhh.eeeee......hhhhhhhhhhhhh...eeee......hhhhhhhhhhh....eeeehhhhhhhhhhhhhhhhhhhhh..eeeee........hhhhhhhhhh...eee.....hhhhhhhhhhhhhhhhhhhhhhee.hhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4z17 B   2 STLIEAIVAREVLDSRGNPTIEVDVRLESGDVGRAIVPSGASTGAHEALELRDGDKSRYNGKGVLKAVQAVNEDIAEALIGFDAADQIALDQELIALDGTPNKSKLGANAILGVSLAAAKAAAAAFGLPLYRYLGGVYAHVLPVPMMNIMNGGQHAFQEFMIMPVGAESFREGLRWGAEIYHMLKKVIHDRGFSTTVGDEGGFAPSLPTNDAPLQLIMEAIEKAGYRPGEQIVIALDPATTEIFEDGKYHLKREGRSLSSAEMVDYWVDLVNRYPIISLEDGLAEDDWEGWALLRAKLGDRVQLVGDDFLVTNVQRLQRAIEAKAANSILIKLNQIGSLTETLSAIQLAQRSGWTAVVSHRSGESEDVTIADLVVATNAGQIKTGAPARTDRIAKYNQLLRIEEELGSAARYAGRSAFKV 426
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151     ||166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416       426
                                                                                                                                                                                     157|                                                                                                                                                                                                                                                                       
                                                                                                                                                                                      163
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Z17)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4Z17)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Z17)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
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    Gly B:204 - Asp B:205   [ RasMol ]  
    Gly B:45 - Ala B:46   [ RasMol ]  
    Leu B:264 - Ser B:265   [ RasMol ]  
    Lys B:258 - Arg B:259   [ RasMol ]  
    Ser A:160 - Thr A:161   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ENO_CHLAA | A9WCM4: 4yws 4z1y

(-) Related Entries Specified in the PDB File

4yws 4z1y