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(-) Description

Title :  CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM BACILLUS HALODURANS C-125 (BH2323, TARGET EFI-511484) WITH BOUND MYO-INOSITOL
 
Authors :  U. Yadava, M. W. Vetting, N. F. Al Obaidi, R. Toro, L. L. Morisco, J. Bena J. Koss, S. R. Wasserman, J. D. Attonito, A. Scott Glenn, S. Chamala, S. Chowdhury, J. Lafleur, J. Love, R. D. Seidel, K. L. Whalen, J. A. Gerl S. C. Almo, Enzyme Function Initiative (Efi)
Date :  11 Mar 15  (Deposition) - 25 Mar 15  (Release) - 25 Mar 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  A
Keywords :  Enzyme Function Initiative, Efi, Structural Genomics, Solute Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  U. Yadava, M. W. Vetting, N. F. Al Obaidi, R. Toro, L. L. Morisco, J. Benach, J. Koss, S. R. Wasserman, J. D. Attonito, A. Scott Glenn, S. Chamala, S. Chowdhury, J. Lafleur, J. Love, R. D. Seidel, K. L. Whalen, J. A. Gerlt, S. C. Almo, Enzyme Function Initiative (Efi)
Crystal Structure Of An Abc Transporter Solute Binding Protein (Ipr025997) From Bacillus Halodurans C-125 (Bh2323, Target Efi-511484) With Bound Myo-Inositol
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - SUGAR ABC TRANSPORTER (SUGAR-BINDING PROTEIN)
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: RESIDUES 21-323
    Gene: BH2323
    Organism Scientific: BACILLUS HALODURANS
    Organism Taxid: 272558
    Strain: ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 18)

Asymmetric/Biological Unit (5, 18)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2INS1Ligand/Ion1,2,3,4,5,6-HEXAHYDROXY-CYCLOHEXANE
3MG3Ligand/IonMAGNESIUM ION
4MSE12Mod. Amino AcidSELENOMETHIONINE
5NA1Ligand/IonSODIUM ION

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:38 , HOH A:501 , HOH A:513 , HOH A:521 , HOH A:559 , HOH A:567 , HOH A:568binding site for residue MG A 401
2AC2SOFTWARELEU A:250 , VAL A:253 , ASP A:274 , HOH A:730 , HOH A:743 , HOH A:790binding site for residue MG A 402
3AC3SOFTWAREHOH A:522 , HOH A:532 , HOH A:572 , HOH A:586binding site for residue MG A 403
4AC4SOFTWAREASP A:53 , GLU A:54 , HOH A:629binding site for residue CL A 404
5AC5SOFTWAREASP A:53 , PHE A:55 , LEU A:56 , ASN A:130 , ARG A:131 , ARG A:183 , ASN A:233 , ASP A:259 , GLN A:279 , HOH A:621 , HOH A:626 , HOH A:628binding site for residue INS A 405
6AC6SOFTWAREILE A:191 , HIS A:194 , LEU A:197 , HOH A:653 , HOH A:656 , HOH A:682binding site for residue NA A 406

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4YO7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4YO7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4YO7)

(-) Exons   (0, 0)

(no "Exon" information available for 4YO7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:287
                                                                                                                                                                                                                                                                                                                               
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeee...hhhhhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhh..eeee...hhhhhhhhhhhhhhhh..eeee.....hhhhh.eeee.hhhhhhhhhhhhhhhhh...eeeeeee....hhhhhhhhhhhhhhhhh...eeeeeeee...hhhhhhhhhhhhhhh.....eeee.hhhhhhhhhhhhhhhhhhhhheee....hhhhhhhhhh.....eee.hhhhhhhhhhhhhhhhhh......ee...eee...hhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4yo7 A  37 TGDSGQKVIGVSISNLDEFLTYmQDAmKEEAANYPDFEFIFSDAQNDSTQQmAQVENFISRNVDAIIVNPVDTTSAVDIVNmVNDAGIPIIIANRTFDGVDQATAFVGSESIQSGLLQmEEVAKLLNNEGNIAImDGELGHEAQImRTEGNKQIIEEHDGLEVVLQGTAKFDRSEGmRLmENWLNSGTEIDAVVANNDEmALGAILALEAVGKLDDVIVAGIDATPAALEAmKEGKLDVTVFQDAKGQGATSVKVAVQAANGEDVEDAmIPYELVTPENVEEYEAKY 323
                                    46        56  |   | 66        76        86 |      96       106       116 |     126       136       146       156       166    |  176     | 186       196       206      |216       226       236       246       256       266 |     276       286       296       306       316       
                                                 59-MSE                       88-MSE                       118-MSE                              155-MSE         171-MSE    182-MSE                        213-MSE                236-MSE                         268-MSE                              305-MSE              
                                                     63-MSE                                                                                                                                                  216-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4YO7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4YO7)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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