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(-) Description

Title :  CRYSTAL STRUCTURE OF THE BACILLUS ANTHRACIS HAL NEAT DOMAIN IN COMPLEX WITH HEME
 
Authors :  R. Torres, C. W. Goulding
Date :  07 Mar 15  (Deposition) - 20 Jul 16  (Release) - 20 Jul 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.15
Chains :  Asym. Unit :  A,C
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  C  (1x)
Keywords :  Heme Binding Protein, Heme-Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  R. Torres, C. W. Goulding
Crystal Structure Of The Bacillus Anthracis Hal Neat Domain In Complex With Heme
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - INTERNALIN
    Chains: A, C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A
    Expression System Strain: BL21-GOLD (DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 37-166
    Gene: HYU01_03010
    Organism Scientific: BACILLUS ANTHRACIS
    Organism Taxid: 1392

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AC
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  C

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1HEM2Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1HEM1Ligand/IonPROTOPORPHYRIN IX CONTAINING FE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:19 , SER A:26 , TYR A:27 , TYR A:31 , PHE A:56 , ILE A:105 , TYR A:112 , LYS A:114 , PHE A:116 , ILE A:118 , PHE A:127 , LYS C:19 , TYR C:27 , HEM C:201binding site for residue HEM A 201
2AC2SOFTWARELYS A:19 , TYR A:27 , HEM A:201 , LYS C:19 , SER C:26 , TYR C:27 , TYR C:31 , ILE C:105 , TYR C:112 , LYS C:114 , PHE C:116 , ILE C:118binding site for residue HEM C 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4YMP)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Leu A:110 -Gly A:111
2Leu C:110 -Gly C:111

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4YMP)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4YMP)

(-) Exons   (0, 0)

(no "Exon" information available for 4YMP)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:112
                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee.......hhhhh.eeeeeeeee..eeeeeeeee.hhhh...ee..ee.eeeeee.....eeeeeeee......eeeeeeeee....eeeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------- Transcript
                 4ymp A  10 VFDAVIKAYKDNSDEESYATVYIKDPKLTIENGKRIITATLKDSDFFDYLKVEFHDVKVLSEDKRKHGTKVIQFEVGELGKRYNMQMHILIPTLGYDKEFKIQFEVNMRTFV 128
                                    19        29        39        49        59  ||    76        86        96       106       116       126  
                                                                               62|                                                          
                                                                                70                                                          


Chain C from PDB  Type:PROTEIN  Length:103
                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeee.......hhhhh.eeeeeee..eeeeeee.hhhh.........eeeeee.....eeeeeee....eeeeeeeeee....eeeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 4ymp C  12 DAVIKAYKDNSDEESYATVYIKDPKLTIRIITATLKDSDFFDYLKVFHDVKVLSEDKRKHGTKVIQFEVLGKRYNMQMHILIPTLGYDKEFKIQFEVNMRTFV 128
                                    21        31       |45        55     || 73        83        95       105       115       125   
                                                      39|               61|                    92|                                 
                                                       44                70                     95
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4YMP)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4YMP)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4YMP)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
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