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(-) Description

Title :  CRYSTAL STRUCTURE OF BETA-KETOACYL-ACP SYNTHASE III (FABH) FROM YERSINIA PESTIS
 
Authors :  J. D. Nanson, J. K. Forwood
Date :  05 Mar 15  (Deposition) - 08 Apr 15  (Release) - 28 Oct 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Fabh, Fatty Acid Biosynthesis, Condensing Enzyme, Thiolase Fold, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. D. Nanson, Z. Himiari, C. M. Swarbrick, J. K. Forwood
Structural Characterisation Of The Beta-Ketoacyl-Acyl Carrier Protein Synthases, Fabf And Fabh, Of Yersinia Pestis.
Sci Rep V. 5 14797 2015
PubMed-ID: 26469877  |  Reference-DOI: 10.1038/SREP14797

(-) Compounds

Molecule 1 - 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE 3
    Chains: A
    EC Number: 2.3.1.180
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMCSG21
    Expression System Strain: BL21(DE3) PLYSS
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: FABH, YPO1597, Y1756, YP_2257
    Mutation: YES
    Organism Scientific: YERSINIA PESTIS
    Organism Taxid: 632
    Synonym: 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE III,BETA-KETOACYL- ACP SYNTHASE III,KAS III

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4YLT)

(-) Sites  (0, 0)

(no "Site" information available for 4YLT)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4YLT)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Phe A:87 -Pro A:88
2Pro A:172 -Gly A:173
3Gly A:306 -Phe A:307

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4YLT)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4YLT)

(-) Exons   (0, 0)

(no "Exon" information available for 4YLT)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:310
                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeeee...eeeehhhhhhhh..hhhhhhhhhh..eeee.....hhhhhhhhhhhhhhhhhh.hhh.eeeeeee.........hhhhhhhhhhh....eeeee.hhhhhhhhhhhhhhhhhhh....eeeeeeeehhhhhh...hhhhhh....eeeeeeeeee....eeeeeeee.hhhhh.ee........eehhhhhhhhhhhhhhhhhhhhhhhh..hhhhh.eeee...hhhhhhhhhhhhh.hhhhh..hhhhhh.hhhhhhhhhhhhhhhh.......eeeeeeee...eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ylt A   1 MYTKILGTGSYLPVQVRSNADLEKMVDTSDEWIVTRTGIRERRIAGLDETVATMGFQAAEKALEMAGIDKDDIGLIIVATTSSSHAFPSSACQVQRMLGIKDAASFDLAAACAGFTYALSVADQYVKSGAVKHAIVIGSDVLSRALDPEDRGTIILFGDGAGAVVLGASEQPGIMSTHLHADGRYGELLALPYPPAYVTMAGNEVFKVAVTELAHIVDETLQVNNLDRTALDWLVPHQANLRIISATAKKLGMGMDKVVITLDRHGNTSAASVPSAFDEAVRDGRIQRGQLVLLEAFGGGFTWGSALVRF 316
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190   ||  206       216       226       236       246       256       266       276       286       296       306       316
                                                                                                                                                                                                                           194|                                                                                                                   
                                                                                                                                                                                                                            201
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4YLT)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4YLT)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4YLT)

(-) Gene Ontology  (10, 10)

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  Sites
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  Cis Peptide Bonds
    Gly A:306 - Phe A:307   [ RasMol ]  
    Phe A:87 - Pro A:88   [ RasMol ]  
    Pro A:172 - Gly A:173   [ RasMol ]  
 
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  4ylt
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  2.3.1.180
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FABH_YERPE | Q8ZFT7: 4z19

(-) Related Entries Specified in the PDB File

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