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(-) Description

Title :  STRUCTURE OF A PUTATIVE PHOSPHOMETHYLPYRIMIDINE KINASE FROM ACINETOBACTER BAUMANNII
 
Authors :  Seattle Structural Genomics Center For Infectious Disease (S
Date :  05 Mar 15  (Deposition) - 01 Apr 15  (Release) - 01 Apr 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Putative Phosphomethylpyrimidine Kinase, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Ssgcid, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Abendroth, C. M. Lukacs, D. D. Lorimer, T. E. Edwards
Structure Of A Putative Phosphomethylpyrimidine Kinase From Acinetobacter Baumannii.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PUTATIVE PHOSPHOMETHYLPYRIMIDINE KINASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 2-255
    Gene: ACINIS123_0279
    Organism Scientific: ACINETOBACTER BAUMANNII IS-123
    Organism Taxid: 903899

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1EDO2Ligand/Ion1,2-ETHANEDIOL
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1EDO4Ligand/Ion1,2-ETHANEDIOL

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:86 , MET A:87 , LEU A:88 , GLY A:89 , VAL A:114 , LEU A:123 , LEU A:129 , PHE A:133binding site for residue EDO A 300
2AC2SOFTWAREGLN A:51 , MET A:87 , HOH A:456binding site for residue EDO A 301

(-) SS Bonds  (1, 1)

Asymmetric Unit
No.Residues
1A:203 -A:215

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4YL5)

 Sequence-Structure Mapping

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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Chain A from PDB  Type:PROTEIN  Length:227
                                                                                                                                                                                                                                                                   
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee......hhhhhhhhhhhhh.eeeeeeeeeeee....eeeeee.hhhhhhhhhhhhh....eeeeee....hhhhhhhhhhhhhhh...eeee.............hhhhhhhhhhhhhhhh.ee..hhhhhhhhhh..hhhhhhhhhhhh...eeeee.........eeeeeee..eeeeeeee...hhhhhhhhhhh..hhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4yl5 A   9 VRPTVLCFSGLDPSGGAGLQADIEAIGQSGAHAAIACTALTIQNSQQVFGFEATSKELLLAQANAVVGDLPIKCVKSGMLGTTDNIAALAEFLRAHPDYQYVLDPVLVANSGGSLGDQATLVKAFVELIPLATLITPNTVELRALTGVTDLDQATQKLFEMGAKAVLVKGGHEDTPDFIKNSLYIDGELAASSTCPCSLASFIAGRLALGDSLKIAVQHAETWLFGV 245
                                    18        28        38        48        58        68        78        88        98       108       118       128       138       148       158       168       178       188       198     ||218       228       238       
                                                                                                                                                                                                                             204|                              
                                                                                                                                                                                                                              215
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4YL5)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (0, 0)

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