4XWF - JenaLib

Title :   CRYSTAL STRUCTURE OF THE ZMP RIBOSWITCH AT 1.80 ANGSTROM

Authors :   J. J. Trausch, R. T. Batey

Date :   28 Jan 15 (Deposition) - 09 Sep 15 (Release) - 09 Sep 15 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.80

Chains :   Asym./Biol. Unit : A

Keywords :   Rna, Riboswitch, Zmp, Aicar (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   J. J. Trausch, J. G. Marcano-Velazquez, M. M. Matyjasik, R. T. Batey
Metal Ion-Mediated Nucleobase Recognition By The Ztp Riboswitch.
Chem. Biol. V. 22 829 2015
PubMed-ID: 26144884 | Reference-DOI: 10.1016/J.CHEMBIOL.2015.06.007

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (4, 9)

Sites (9, 9)

Asymmetric Unit (9, 9)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	U A:11 , G A:12 , A A:28 , C A:29 , G A:51 , C A:52 , C A:57 , U A:58 , G A:59 , MG A:102 , HOH A:203 , HOH A:210 , HOH A:222 , HOH A:228 , HOH A:232	binding site for residue AMZ A 101
2	AC2	SOFTWARE	U A:11 , C A:29 , AMZ A:101 , HOH A:221 , HOH A:222 , HOH A:225	binding site for residue MG A 102
3	AC3	SOFTWARE	C A:52 , HOH A:210 , HOH A:214 , HOH A:228 , HOH A:231 , HOH A:237	binding site for residue MG A 103
4	AC4	SOFTWARE	U A:22 , G A:23 , CAC A:109 , HOH A:255 , HOH A:278	binding site for residue MG A 104
5	AC5	SOFTWARE	U A:7 , G A:8 , G A:37 , HOH A:273 , HOH A:299	binding site for residue IRI A 105
6	AC6	SOFTWARE	G A:48 , G A:60 , G A:61 , C A:62 , IRI A:107 , HOH A:292	binding site for residue IRI A 106
7	AC7	SOFTWARE	U A:58 , G A:59 , IRI A:106 , HOH A:203 , HOH A:232	binding site for residue IRI A 107
8	AC8	SOFTWARE	G A:1 , C A:10 , C A:30 , HOH A:230	binding site for residue IRI A 108
9	AC9	SOFTWARE	U A:22 , G A:23 , G A:24 , G A:25 , MG A:104 , HOH A:256	binding site for residue CAC A 109

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

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Chain A from PDB  Type:RNA  Length:64
                                                                                               
                  4xwf A  1 GGGUCGUGACUGGCGAACAGGUGGGAAACCACCGGGGAGCGACCCUUGCCGCCCGCCUGGGCAA 64
                                    10        20        30        40        50        60

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Classification and Annotation

SCOP Domains (0, 0)

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Pfam Domains (0, 0)

Gene Ontology (0, 0)

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