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(-) Description

Title :  SADC (300-487) FROM PSEUDOMONAS AERUGINOSA PAO1
 
Authors :  C. Liu, S. Liu, L. Gu
Date :  14 Nov 14  (Deposition) - 18 Nov 15  (Release) - 18 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.81
Chains :  Asym. Unit :  A,B,C
Biol. Unit 1:  A,B,C  (2x)
Keywords :  Ggdef Domain, Dgc Activity, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Liu, S. Liu, L. Gu
Crystal Structure Of Sadc (300-487) From Pseudomonas Aeruginosa Pao1
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - UNCHARACTERIZED PROTEIN
    Chains: A, B, C
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Fragment: UNP RESIDUES 300-487
    Gene: PA4332
    Organism Scientific: PSEUDOMONAS AERUGINOSA PAO1
    Organism Taxid: 208964
    Synonym: SADC

 Structural Features

(-) Chains, Units

  123
Asymmetric Unit : ABC
Biological Unit 1 (2x): ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 15)

Asymmetric Unit (1, 15)
No.NameCountTypeFull Name
1MSE15Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 30)
No.NameCountTypeFull Name
1MSE30Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 4WXO)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4WXO)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4WXO)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4WXO)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4WXO)

(-) Exons   (0, 0)

(no "Exon" information available for 4WXO)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:182
                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh...ee....eehhhhhhhhhhhhhhh.....eeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeee....eeeeeee..hhhhhhhhhhhhhhhhhhh...........eeeeeeeee...hhhhhhhhhhhhhhhhhhh....eee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wxo A 302 RYALQAHQDTLRGmmRQLEDLVATDELTGLFNRRHFmRmASRALEDLLPNRQHGLALIDLDHFKRINDRHGHAAGDRVLQTFAAVARSCLRDGDVLARYGGEEFVLLLPHADAEQLESCCERLRLAFQQAEPVGVTVDTLSLSVGmTLLYADDDLDEALQRADQALYRAKRGGRNRCDATWE 483
                                   311   ||  321       331      |341       351       361       371       381       391       401       411       421       431       441     | 451       461       471       481  
                                       315-MSE                338-MSE                                                                                                      447-MSE                                
                                        316-MSE                 340-MSE                                                                                                                                           


Chain B from PDB  Type:PROTEIN  Length:182
                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhh.....eeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeee....eeeeee...hhhhhhhhhhhhhhhhhhh...........eeeeeeeee...hhhhhhhhhhhhhhhhhhh....eee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wxo B 302 RYALQAHQDTLRGmmRQLEDLVATDELTGLFNRRHFmRmASRALEDLLPNRQHGLALIDLDHFKRINDRHGHAAGDRVLQTFAAVARSCLRDGDVLARYGGEEFVLLLPHADAEQLESCCERLRLAFQQAEPVGVTVDTLSLSVGmTLLYADDDLDEALQRADQALYRAKRGGRNRCDATWE 483
                                   311   ||  321       331      |341       351       361       371       381       391       401       411       421       431       441     | 451       461       471       481  
                                       315-MSE                338-MSE                                                                                                      447-MSE                                
                                        316-MSE                 340-MSE                                                                                                                                           


Chain C from PDB  Type:PROTEIN  Length:182
                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhh.ee....eehhhhhhhhhhhhhhhh....eeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh....eeee....eeeeee...hhhhhhhhhhhhhhhhhh............eeeeeeeee...hhhhhhhhhhhhhhhhhhh....eee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wxo C 302 RYALQAHQDTLRGmmRQLEDLVATDELTGLFNRRHFmRmASRALEDLLPNRQHGLALIDLDHFKRINDRHGHAAGDRVLQTFAAVARSCLRDGDVLARYGGEEFVLLLPHADAEQLESCCERLRLAFQQAEPVGVTVDTLSLSVGmTLLYADDDLDEALQRADQALYRAKRGGRNRCDATWE 483
                                   311   ||  321       331      |341       351       361       371       381       391       401       411       421       431       441     | 451       461       471       481  
                                       315-MSE                338-MSE                                                                                                      447-MSE                                
                                        316-MSE                 340-MSE
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4WXO)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4WXO)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4WXO)

(-) Gene Ontology  (2, 2)

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