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(-) Description

Title :  CRYSTAL STRUCTURE OF THE ANTHRANILATE COA LIGASE AUAEII IN COMPLEX WITH ANTHRANOYL-AMP
 
Authors :  S. C. Tsai, R. Muller, D. R. Jackson, S. S. Tu, M. Nguyen, J. F. Barajas, D. Pistorious, D. Krug
Date :  04 Nov 14  (Deposition) - 11 Nov 15  (Release) - 27 Jan 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.60
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Anthranilate, Coa Ligase, Aurachin, Natural Product Biosynthesis, Ligase-Ligase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. R. Jackson, S. S. Tu, M. Nguyen, J. F. Barajas, A. J. Schaub, D. Krug, D. Pistorius, R. Luo, R. Muller, S. C. Tsai
Structural Insights Into Anthranilate Priming During Type I Polyketide Biosynthesis.
Acs Chem. Biol. V. 11 95 2016
PubMed-ID: 26473393  |  Reference-DOI: 10.1021/ACSCHEMBIO.5B00500

(-) Compounds

Molecule 1 - ANTHRANILATE-COA LIGASE
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-29B (+)
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector: PLASMID
    Expression System Vector Type: PLASMID
    Gene: AUAEII
    Organism Scientific: STIGMATELLA AURANTIACA
    Organism Taxid: 41

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
13UK2Ligand/Ion5'-O-[(S)-[(2-AMINOBENZOYL)OXY](HYDROXY)PHOSPHORYL]ADENOSINE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
13UK1Ligand/Ion5'-O-[(S)-[(2-AMINOBENZOYL)OXY](HYDROXY)PHOSPHORYL]ADENOSINE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
13UK1Ligand/Ion5'-O-[(S)-[(2-AMINOBENZOYL)OXY](HYDROXY)PHOSPHORYL]ADENOSINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:175 , PHE A:220 , THR A:221 , PHE A:222 , ALA A:293 , SER A:294 , GLU A:295 , ALA A:296 , ASP A:315 , GLY A:316 , ILE A:317 , GLY A:318 , CYS A:319 , THR A:320 , PHE A:323 , HIS A:324 , THR A:395 , ASP A:397 , HIS A:409 , ARG A:412 , LYS A:506 , HOH A:750 , HOH A:755 , HOH A:809binding site for residue 3UK A 601
2AC2SOFTWARESER B:175 , PHE B:220 , THR B:221 , PHE B:222 , ALA B:293 , SER B:294 , GLU B:295 , ALA B:296 , ASP B:315 , GLY B:316 , ILE B:317 , GLY B:318 , CYS B:319 , THR B:320 , PHE B:323 , THR B:395 , ASP B:397 , HIS B:409 , ARG B:412 , LYS B:506 , HOH B:908binding site for residue 3UK B 601

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4WV3)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Leu A:20 -Pro A:21
2Gly A:180 -Gly A:181
3Leu B:20 -Pro B:21

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4WV3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4WV3)

(-) Exons   (0, 0)

(no "Exon" information available for 4WV3)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:516
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .hhhhh......hhhhhh........eeee....eeehhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhhh.eeee.....hhhhhhhhhhhh...eeeee..hhhhhhhhhhhh....eeeee...eehhhhhh...............eeeeeee......eeeeee.hhhhhhhhhh...........eeee.....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhh..eeeehhhhhhhhhh..hhhhh......eeee.....hhhhhhhhhhhhh..eeeeee......eeee............ee....eeeee............eeeeee..........hhhhhhhhee..eeeeeeeeee.....eeeeee....eee..eeehhhhhhhhhh....eeeeeeeeee.....eeeeeeeee......hhhhhhhhhhhhhhhhhhhhh..eeeee...........hhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4wv3 A   1 MKASDLPLYYNAVDILERNLPVRANKTALFTPDREMTFRQVSNEANQVGNALKGLGVRFGECVGLLTLDSAEWVTSFFGIVKLGAIAVGINTLLKPPEYEYILRDCRARVLIVHQEFLPLIESIRGNLPMLEHIVVIGGYLSFNDWIRPQPTTLEAAQSHREDICSLNYSSGTGGPKGIPHAHKDYPLTAQLWGVNVLGLRESDRTFALAKLFFTFGTGGNLIFPWYVGASCVLFPGAARVASNVLSTISRFKPTIFYNAPTGYAAALALKDFSQHDLSSLRLCVSASEALPAALWYAWKEATGVDIIDGIGCTENFHIFISNRPGDIRPGSSGKPVEGYELKLVDDEGKTVPAGEIGNVLLRSETAALSYWHNFEKSRQTFQGEWLATGDKYFVDADGYYWHAGRSDDMLKVGGIWVSPVEVESTLIQHPAVQECAVIGCPDQSRLIKPKAFIILKPEQIPSEALIRQITDHCTEKMAAYKRPRWIEFVTELPKTATGKIQRFKLRSAAKLAAAL 522
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                                                                                                                                                                   138|                               178|                                                                                                                                                                                                                                                                                                                                                      
                                                                                                                                                                    144                                180                                                                                                                                                                                                                                                                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:518
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhh........eeee....eeehhhhhhhhhhhhhhhhhh......eeeee...hhhhhhhhhhhhhh..eeee.....hhhhhhhhhhhh...eeeee..hhhhhhhhhhhh....eeeee........eehhhhhh...............eeeeeee.......eeeeee.hhhhhhhhhh...........eeee.....hhhhhhhhhhhhhhh..eee.......hhhhhhhhhhhhh..eeeehhhhhhhhhh..hhhhh......eeee.....hhhhhhhhhhhhh..eeeeee.hhhh.eeee............ee....eeeee............eeeeee..........hhhhhhhhee..eeeeeeeeee.....eeeeee.hhheee..eeehhhhhhhhhh....eeeeeeeee....eeeeeeee.....hhhhhhhhhhhhhhhh.......eeee............hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4wv3 B   1 MKASDLPLYYNAVDILERNLPVRANKTALFTPDREMTFRQVSNEANQVGNALKGLGVRFGECVGLLTLDSAEWVTSFFGIVKLGAIAVGINTLLKPPEYEYILRDCRARVLIVHQEFLPLIESIRGNLPMLEHIVVIGEGPQEGYLSFNDWIRPQPTTLEAAQSHREDICSLNYSSGTTGGPKGIPHAHKDYPLTAQLWGVNVLGLRESDRTFALAKLFFTFGTGGNLIFPWYVGASCVLFPGAARVASNVLSTISRFKPTIFYNAPTGYAAALALKDFSQHDLSSLRLCVSASEALPAALWYAWKEATGVDIIDGIGCTENFHIFISNRPGDIRPGSSGKPVEGYELKLVDDEGKTVPAGEIGNVLLRSETAALSYWHNFEKSRQTFQGEWLATGDKYFVDADGYYWHAGRSDDMLKVGGIWVSPVEVESTLIQHPAVQECAVIGCPDLIKPKAFIILKPQIPSEALIRQITDHCTEKMAAYKRPRWIEFVTELPKTATGKIQRFKLRSAAKLAAAL 522
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       453       463||     474       484       494       504       514        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          449|        464|                                                        
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           453         466
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4WV3)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4WV3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4WV3)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)

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