Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asymmetric Unit
(-)Asym. Unit - sites
(-)Biological Unit 1
(-)Biol. Unit 1 - sites
(-)Biological Unit 2
(-)Biological Unit 3
(-)Biological Unit 4
collapse expand < >
Image Asymmetric Unit
Asymmetric Unit  (Jmol Viewer)
Image Asym. Unit - sites
Asym. Unit - sites  (Jmol Viewer)
Image Biological Unit 1
Biological Unit 1  (Jmol Viewer)
Image Biol. Unit 1 - sites
Biol. Unit 1 - sites  (Jmol Viewer)
Image Biological Unit 2
Biological Unit 2  (Jmol Viewer)
Image Biological Unit 3
Biological Unit 3  (Jmol Viewer)
Image Biological Unit 4
Biological Unit 4  (Jmol Viewer)

(-) Description

Title :  CRYSTAL STRUCTURE OF BBS1N IN COMPLEX WITH ARL6DN
 
Authors :  A. Mourao, E. Lorentzen
Date :  17 Sep 14  (Deposition) - 19 Nov 14  (Release) - 17 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.45
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  E,F  (1x)
Biol. Unit 2:  A,B  (1x)
Biol. Unit 3:  C,D  (1x)
Biol. Unit 4:  G,H  (1x)
Keywords :  Hydrolase-Structural Protein Complex, Bbsome, Gtp, Coat Complex, (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Mourao, A. R. Nager, M. V. Nachury, E. Lorentzen
Structural Basis For Membrane Targeting Of The Bbsome By Arl6
Nat. Struct. Mol. Biol. V. 21 1035 2014
PubMed-ID: 25402481  |  Reference-DOI: 10.1038/NSMB.2920

(-) Compounds

Molecule 1 - BARDET-BIEDL SYNDROME 1 PROTEIN
    Chains: B, D, F, H
    Engineered: YES
    Expression System: TRICHOPLUSIA NI
    Expression System Cell Line: HIGH FIVE BTI-TN-5B1-4
    Expression System Common: CABBAGE LOOPER
    Expression System Taxid: 7111
    Fragment: WD40, RESIDUES 1-425
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055
    Synonym: BBS1
 
Molecule 2 - ARF-LIKE SMALL GTPASE
    Chains: A, C, G
    Engineered: YES
    Expression System: TRICHOPLUSIA NI
    Expression System Cell Line: HIGH FIVE BTI-TN-5B1-4
    Expression System Common: CABBAGE LOOPER
    Expression System Taxid: 7111
    Fragment: GTPASE, RESIDUES 16-180
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055
    Synonym: ARL6
 
Molecule 3 - ARF-LIKE SMALL GTPASE
    Chains: E
    Engineered: YES
    Expression System: TRICHOPLUSIA NI
    Expression System Cell Line: HIGH FIVE BTI-TN-5B1-4
    Expression System Common: CABBAGE LOOPER
    Expression System Taxid: 7111
    Fragment: GTPASE, RESIDUES 16-180
    Organism Scientific: CHLAMYDOMONAS REINHARDTII
    Organism Taxid: 3055
    Synonym: ARL6

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x):     EF  
Biological Unit 2 (1x): AB      
Biological Unit 3 (1x):   CD    
Biological Unit 4 (1x):       GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 8)

Asymmetric Unit (2, 8)
No.NameCountTypeFull Name
1GTP4Ligand/IonGUANOSINE-5'-TRIPHOSPHATE
2MG4Ligand/IonMAGNESIUM ION
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1GTP1Ligand/IonGUANOSINE-5'-TRIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1GTP1Ligand/IonGUANOSINE-5'-TRIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1GTP1Ligand/IonGUANOSINE-5'-TRIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1GTP1Ligand/IonGUANOSINE-5'-TRIPHOSPHATE
2MG-1Ligand/IonMAGNESIUM ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN A:27 , SER A:28 , GLY A:29 , LYS A:30 , THR A:31 , THR A:32 , PRO A:49 , THR A:50 , MET A:70 , SER A:71 , GLY A:72 , ASN A:128 , LYS A:129 , ASP A:131 , ASN A:161 , GLY A:162 , LEU A:163 , MG A:601BINDING SITE FOR RESIDUE GTP A 600
2AC2SOFTWARETHR A:31 , THR A:50 , GTP A:600BINDING SITE FOR RESIDUE MG A 601
3AC3SOFTWAREASN C:27 , GLY C:29 , LYS C:30 , THR C:31 , THR C:32 , PRO C:49 , THR C:50 , SER C:71 , GLY C:72 , ASN C:128 , LYS C:129 , ASP C:131 , LEU C:132 , ASN C:161 , GLY C:162 , LEU C:163 , MG C:601BINDING SITE FOR RESIDUE GTP C 600
4AC4SOFTWARETHR C:31 , THR C:50 , ASP C:69 , MET C:70 , GTP C:600BINDING SITE FOR RESIDUE MG C 601
5AC5SOFTWAREASN E:27 , SER E:28 , GLY E:29 , LYS E:30 , THR E:31 , THR E:32 , THR E:50 , SER E:71 , GLY E:72 , ASN E:128 , LYS E:129 , ASP E:131 , ILE E:132 , ASN E:161 , GLY E:162 , LEU E:163 , MG E:601BINDING SITE FOR RESIDUE GTP E 600
6AC6SOFTWARELYS E:30 , THR E:31 , THR E:50 , ASP E:69 , GTP E:600BINDING SITE FOR RESIDUE MG E 601
7AC7SOFTWAREASN G:27 , SER G:28 , GLY G:29 , LYS G:30 , THR G:31 , THR G:32 , ALA G:48 , PRO G:49 , THR G:50 , SER G:71 , GLY G:72 , ASN G:128 , LYS G:129 , ASP G:131 , LEU G:132 , ASN G:161 , GLY G:162 , LEU G:163 , MG G:601BINDING SITE FOR RESIDUE GTP G 600
8AC8SOFTWARETHR G:31 , THR G:50 , GTP G:600BINDING SITE FOR RESIDUE MG G 601

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1B:343 -D:343
2F:343 -H:343

(-) Cis Peptide Bonds  (5, 5)

Asymmetric Unit
No.Residues
1Arg B:112 -Leu B:113
2Asn D:248 -Pro D:249
3Asn F:129 -Leu F:130
4Arg H:112 -Leu H:113
5Asn H:129 -Leu H:130

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4V0M)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4V0M)

(-) Exons   (0, 0)

(no "Exon" information available for 4V0M)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:166
                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeee......hhhhhhh................eeeeeeee..eeeeeeee..hhhhhhhhhhhh....eeeeeee.....hhhhhhhhhhhhhhh.......eeeeee........hhhhhhhhh.........eeeee.......hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4v0m A  15 SKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVDEVEKGPLTFTVFDMSGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKKDLPVAMPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERLS 180
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174      


Chain B from PDB  Type:PROTEIN  Length:333
                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee.......hhh.eeee........eeeee.....eeeee..eeee.........eeeee..........eeeeee..eeee.........ee.....................eeeeeeee.........eeeeeee...eeeee......eeeeee....eeeeeeee.....eeeeeee...eeeeee..ee....ee....eeeeee....eeeee...eeeee.....eeeeee....eeeee..ee.....ee.eeeee...eeeee.......eee....eeeeeeeee..eeeeeeeee....eeeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4v0m B  36 VRSVWLDAFNDPVAGISAYTPCVHTCNLFGDGENRLVIADEDRKLKIWKGTQKASEHPLLDTPVAICSYISENTAPRLPALAVAAGSHIYIYRNLRPYYKFVLPPENVNTEEQQGQPLVATTVITCMDVVKQAIDEPDAVSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRITVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSLYLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGREDNTLLAITKSGALDIKMLPRTANLE 425
                                    45        55        65        75        85        95       105       115       125       135       145  ||   212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422   
                                                                                                                                          148|                                                                                                                                                                                                                           
                                                                                                                                           206                                                                                                                                                                                                                           


Chain C from PDB  Type:PROTEIN  Length:166
                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee....hhhhhhhh................eeeeeeee..eeeeeeee..hhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh.......eeeee.........hhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4v0m C  15 SKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVDEVEKGPLTFTVFDMSGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKKDLPVAMPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERLS 180
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174      


Chain D from PDB  Type:PROTEIN  Length:303
                                                                                                                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee.......hhh.eeee........eeeee.....eeeee..eeee.........eeeee...eeeeee..eeee.........ee....eeeeeeee.........eeeeeee...eeee......eeee....eeeeeee....eeeeee...eeeeee..ee....ee....eeeeee....eeeee...eeeee.....eeeeee....eeeee............eeeee...eeeeee..eeeeeee....eeeeeeeee..eeeeeeeee....eeeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4v0m D  36 VRSVWLDAFNDPVAGISAYTPCVHTCNLFGDGENRLVIADEDRKLKIWKGTQKASEHPLLDTPVAICSYILPALAVAAGSHIYIYRNLRPYYKFVLPTVITCMDVVKQAIDEPDAVSCLVVGTESGRILILNPAIVKNIWVGITPAMIAVQGELYRITVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSLYLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGREDNTLLAITKSGALDIKMLPRTANLE 425
                                    45        55        65        75        85        95       105|      122       132      |216       226       236       246  ||   259       269   ||  282       292       302       312       322       332       342       352       362       372       382       392       402       412       422   
                                                                                               105|                       139|                                249|                 273|                                                                                                                                                    
                                                                                                113                        214                                 253                  277                                                                                                                                                    


Chain E from PDB  Type:PROTEIN  Length:166
                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee....hhhhhhhh................eeeeeeee..eeeeeeee..hhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhhhh.......eeeee.........hhhhhhhhhhhhhh....eeeee.......hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4v0m E  15 SKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVDEVEKGPLTFTVFDMSGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKKDIPVAMPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERLS 180
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174      


Chain F from PDB  Type:PROTEIN  Length:309
                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee.......hhh.eeee........eeeee.....eeeee..eeee.........eeee...eeee...ee...........ee......eeeeeeee.........eeeeeee...eeee.........eeee....eeeeeeee.....eeeeeee...eeeeee..ee....ee....eeeeee....eeeee...eeeee.....eeeeee....eeeeeeeee.....eeeeeeee...eeeeee..eeeeeee....eeeeeeeee..eeeeeeeee....eeeee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4v0m F  36 VRSVWLDAFNDPVAGISAYTPCVHTCNLFGDGENRLVIADEDRKLKIWKGTQKASEHPLLDTPVAICSYPALAVAAGSHIYIYRNLRPYYKFVLPPETVITCMDVVKQAIDEPDAVSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRITVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSLYLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGREDNTLLAITKSGALDIKMLPRTANLE 425
                                    45        55        65        75        85        95       114       124       134      |216       226       236       246       256       266       276       286       296       306       316       326       336       346       356       366       376       386       396       406       416         
                                                                                              104|                        141|                                                                                                                                                                                                                   
                                                                                               114                         214                                                                                                                                                                                                                   


Chain G from PDB  Type:PROTEIN  Length:166
                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....hhhhhhh................eeeeeeee..eeeeeeee..hhhhhhhhhhhh....eeeeeee.....hhhhhhhhhhhhhhh.......eeeeee........hhhhhhhhh.........eeeee.......hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4v0m G  15 SKKVNVLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVGFTVDEVEKGPLTFTVFDMSGAGRYRTLWEQYYREADAVVFVVDSADKLRMVVARDEMEHMLKHSNMRKVPILYFANKKDLPVAMPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERLS 180
                                    24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174      


Chain H from PDB  Type:PROTEIN  Length:325
                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeee.......hhh.eeee........eeeee.....eeeee..eeee.........eeeeee........eeeeeee..eeee.........ee.............eeeeeeee.........eeeeeee...eeeee......eeeeee....eeeeeeeee...eeeeeeee...eeeeee..ee....ee....eeeeee....eeeee...eeeee.....eeeeee....eeeee..ee.....ee..eeee...eee.........eee....eeeeeeeee..eeeeeeeee....eeeee........ Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4v0m H  36 VRSVWLDAFNDPVAGISAYTPCVHTCNLFGDGENRLVIADEDRKLKIWKGTQKASEHPLLDTPVAICSYISENTAPRLPALAVAAGSHIYIYRNLRPYYKFVLPPENVNTEETTVITCMDVVKQAIDEPDAVSCLVVGTESGRILILNPAGTAIVKNIWVGITPAMIAVQGELDVGYRITVAGRDGKLYHIRNGELSQTIIQLEAQPVGLVRLAKHVAVGCMNDVVHAYTPTGHKSWSLYLPCHILAMQRMEVTGQRNTKALIVALSNGEVRVYNEKLLVSVHVSPNPVTALWFGRYGREDNTLLAITKSGALDIKMLPRTANLE 425
                                    45        55        65        75        85        95       105       115       125       135       145 ||    220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420     
                                                                                                                                         147|                                                                                                                                                                                                                    
                                                                                                                                          213
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4V0M)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4V0M)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4V0M)

(-) Gene Ontology  (12, 12)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
    GTP  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
    MG  [ RasMol | Jena3D ]  +environment [ RasMol | Jena3D ]
 
  Sites
    AC1  [ RasMol ]  +environment [ RasMol ]
    AC2  [ RasMol ]  +environment [ RasMol ]
    AC3  [ RasMol ]  +environment [ RasMol ]
    AC4  [ RasMol ]  +environment [ RasMol ]
    AC5  [ RasMol ]  +environment [ RasMol ]
    AC6  [ RasMol ]  +environment [ RasMol ]
    AC7  [ RasMol ]  +environment [ RasMol ]
    AC8  [ RasMol ]  +environment [ RasMol ]
 
  Cis Peptide Bonds
    Arg B:112 - Leu B:113   [ RasMol ]  
    Arg H:112 - Leu H:113   [ RasMol ]  
    Asn D:248 - Pro D:249   [ RasMol ]  
    Asn F:129 - Leu F:130   [ RasMol ]  
    Asn H:129 - Leu H:130   [ RasMol ]  
 
Biological Units
  Complete Structure
    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]
    Biological Unit 3  [ Jena3D ]
    Biological Unit 4  [ Jena3D ]

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym. Unit PNG format | Asym. Unit - sites PNG format | Biol. Unit 1 PNG format | Biol. Unit 1 - sites PNG format | Biol. Unit 2 PNG format | Biol. Unit 3 PNG format | Biol. Unit 4 PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  4v0m
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  A8JEA1_CHLRE | A8JEA1
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
  A8JF99_CHLRE | A8JF99
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/TrEMBL
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  A8JEA1_CHLRE | A8JEA1
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)
  A8JF99_CHLRE | A8JF99
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A8JEA1_CHLRE | A8JEA1: 4v0n 4v0o
        A8JF99_CHLRE | A8JF99: 4v0k 4v0l 4v0n 4v0o

(-) Related Entries Specified in the PDB File

4v0k CRYSTAL STRUCTURE OF THE CRARL6DN IN THE GDP BOUND FORM
4v0n CRYSTAL STRUCTURE OF BBS1N IN COMPLEX WITH ARL6DN, SOAKED WITH MERCURY
4v0o CRYSTAL STRUCTURE OF BBS1N IN COMPLEX WITH ARL6DN, SOAKED WITH LEAD