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(-) Description

Title :  SHOTGUN PROTEOLYSIS: A PRACTICAL APPLICATION
 
Authors :  M. D. Allen, M. Bycroft, S. M. V. Freund, D. Christ
Date :  05 Sep 14  (Deposition) - 17 Sep 14  (Release) - 27 Apr 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. D. Allen, M. Christie, P. Jones, B. T. Porebski, B. Roome, S. M. Freund, A. M. Buckle, M. Bycroft, D. Christ
Solution Structure Of A Soluble Fragment Derived From A Membrane Protein By Shotgun Proteolysis.
Protein Eng. Des. Sel. V. 28 445 2015
PubMed-ID: 25877662  |  Reference-DOI: 10.1093/PROTEIN/GZV021

(-) Compounds

Molecule 1 - PUTATIVE MEMBRANE PROTEIN IGAA HOMOLOG
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Expression System Vector: MODIFIED PRSETA
    Organism Scientific: ESCHERICHIA COLI
    Organism Taxid: 562
    Synonym: YRFF

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:119
                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeee.hhhhhhhhhhhhhhhhhh..................hhhh.eeeeeee.eeee..........eeee..eee.............eeeeeee....eeeeee..ee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 4uzm A  36 AFADAQTRKLTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGISTDDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQE 154
                                    45        55        65        75        85        95       105       115       125       135       145
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (6, 6)

NMR Structure(hide GO term definitions)

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 Related Entries

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(-) Related Entries Specified in the PDB File

4uzw HIGH-RESOLUTION NMR STRUCTURES OF THE DOMAINS OF SACCHEROMYCES CEREVISIAE THO1
4uzx HIGH-RESOLUTION NMR STRUCTURES OF THE DOMAINS OF SACCHEROMYCES CEREVISIAE THO1