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(-) Description

Title :  STRUCTURE OF THE SPLICEOSOMAL PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CWC27 FROM CHAETOMIUM THERMOPHILUM
 
Authors :  A. Ulrich, M. C. Wahl
Date :  15 Aug 14  (Deposition) - 19 Nov 14  (Release) - 24 Dec 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.30
Chains :  Asym./Biol. Unit :  A
Keywords :  Cyclophilin-Type Ppiase, Nucleus, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Ulrich, M. C. Wahl
Structure And Evolution Of The Spliceosomal Peptidyl-Prolyl Cis-Trans Isomerase Cwc27.
Acta Crystallogr. , Sect. D V. 70 3110 2014
PubMed-ID: 25478830  |  Reference-DOI: 10.1107/S1399004714021695

(-) Compounds

Molecule 1 - SPLICEOSOMAL PROTEIN CWC27
    Chains: A
    EC Number: 5.2.1.8
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PETM11
    Expression System Strain: BL21 ROSETTA
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: PPIASE DOMAIN, UNP RESIDUES 2-201
    Gene: CTHT_0005290
    Organism Scientific: CHAETOMIUM THERMOPHILUM VAR. THERMOPHILUM DSM 1495
    Organism Taxid: 759272

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 11)

Asymmetric/Biological Unit (3, 11)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2EDO9Ligand/Ion1,2-ETHANEDIOL
3PE51Ligand/Ion3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:94 , TYR A:185 , PRO A:186 , HOH A:441 , HOH A:475 , HOH A:511BINDING SITE FOR RESIDUE EDO A 301
02AC2SOFTWARESER A:44 , GLY A:47 , ASP A:50 , ASN A:191 , ILE A:192 , HOH A:587BINDING SITE FOR RESIDUE EDO A 302
03AC3SOFTWAREARG A:56 , GLN A:64 , PHE A:140 , HOH A:434 , HOH A:515 , HOH A:516 , HOH A:572BINDING SITE FOR RESIDUE EDO A 303
04AC4SOFTWAREPRO A:34 , PRO A:68 , PRO A:90 , TRP A:91 , PE5 A:310 , HOH A:558 , HOH A:656BINDING SITE FOR RESIDUE EDO A 304
05AC5SOFTWARELYS A:117 , GLU A:147 , ASN A:150 , ASN A:151BINDING SITE FOR RESIDUE EDO A 305
06AC6SOFTWAREHIS A:73 , TYR A:166 , HOH A:584 , HOH A:649BINDING SITE FOR RESIDUE EDO A 306
07AC7SOFTWAREGLY A:51 , LYS A:97 , THR A:190BINDING SITE FOR RESIDUE EDO A 307
08AC8SOFTWAREARG A:38 , GLN A:42 , ASN A:197 , HOH A:481 , HOH A:642BINDING SITE FOR RESIDUE EDO A 308
09AC9SOFTWAREARG A:120 , GLY A:122 , VAL A:159 , ASP A:201 , HOH A:490BINDING SITE FOR RESIDUE EDO A 309
10BC1SOFTWAREGLY A:51 , PRO A:68 , THR A:69 , GLY A:70 , GLN A:95 , LYS A:109 , ARG A:182 , EDO A:304 , HOH A:421BINDING SITE FOR RESIDUE PE5 A 310
11BC2SOFTWARELYS A:97 , HIS A:99 , ASN A:100 , ASP A:133 , GLU A:175 , HOH A:417BINDING SITE FOR RESIDUE ACT A 311

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4R3F)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4R3F)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4R3F)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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Chain A from PDB  Type:PROTEIN  Length:196
                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeee....eeeee....hhhhhhhhhhhhhh.......eeeee...eeee.............hhhhh........hhhhhhhhhh.....................eeee............eeee...hhhhh....eeeee....hhhhhhhhh................eeeeeeee..... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4r3f A   6 NLEPQPTGAVIIHTTQGDLKVELFAKQTPLTCRNFLQHSLDGYYDGTIFHRLVPGFIIQGGDPTGTGHGGESIYDGGAFSGDLDPWPMDQRKGHNAGPMGVNFKDEFHSRLKFNRRGLLGMANEGAPDTNGSQFFFTLGKAEELNNKNTLFGRVAAGDTIYNLMKWGEAELIEGTERPQYPVKITNIEILLNPFPD 201
                                    15        25        35        45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4R3F)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (4, 4)

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2hq6 4r3e