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(-) Description

Title :  MTFP* PDCL2 SOAK
 
Authors :  J. Fischer, F. Quitterer, M. Groll, J. Eppinger
Date :  02 May 14  (Deposition) - 21 May 14  (Release) - 21 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Artificial Metalloenzyme, Metalloenzyme, Bioconjugation, Fluorescent Protein, Protein Design, Thermostable, Temperature Stable, Solvent Stable, Robust (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Fischer, F. Quitterer, M. Groll, J. Eppinger
Mtfp*: An Imperishable And Versatile Protein Host For Anchoring Diverse Ligands And Organocatalysts
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - GFP-LIKE FLUORESCENT CHROMOPROTEIN CFP484
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET303
    Expression System Strain: BL21-GOLD(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Organism Common: BROWN STAR POLYP
    Organism Scientific: CLAVULARIA SP.
    Organism Taxid: 86521

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 15)

Asymmetric/Biological Unit (4, 15)
No.NameCountTypeFull Name
1CL5Ligand/IonCHLORIDE ION
2CO31Ligand/IonCARBONATE ION
3PD8Ligand/IonPALLADIUM ION
4PIA1Mod. Amino Acid[(4Z)-2-[(1S)-1-AMINOETHYL]-4-(4-HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC ACID

(-) Sites  (13, 13)

Asymmetric Unit (13, 13)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:102 , LYS A:121 , GLU A:123 , HOH A:1011BINDING SITE FOR RESIDUE PD A 901
02AC2SOFTWAREASP A:7 , LYS A:32 , CL A:908 , HOH A:1050 , HOH A:1052BINDING SITE FOR RESIDUE PD A 902
03AC3SOFTWAREGLU A:43 , LYS A:45BINDING SITE FOR RESIDUE PD A 903
04AC4SOFTWARELYS A:104 , LYS A:135 , GLU A:164BINDING SITE FOR RESIDUE PD A 904
05AC5SOFTWAREGLU A:117 , LYS A:202BINDING SITE FOR RESIDUE PD A 905
06AC6SOFTWAREGLU A:28 , LYS A:154 , HOH A:1045 , HOH A:1046BINDING SITE FOR RESIDUE PD A 906
07AC7SOFTWARELYS A:11 , ASP A:150 , CL A:909BINDING SITE FOR RESIDUE PD A 907
08AC8SOFTWAREASP A:7 , LYS A:32 , PD A:902 , HOH A:1050BINDING SITE FOR RESIDUE CL A 908
09AC9SOFTWARELYS A:11 , GLU A:110 , ASP A:150 , LYS A:160 , PD A:907BINDING SITE FOR RESIDUE CL A 909
10BC1SOFTWARETHR A:92BINDING SITE FOR RESIDUE CL A 910
11BC2SOFTWARELYS A:9 , ASP A:112BINDING SITE FOR RESIDUE CL A 911
12BC3SOFTWAREASP A:172 , LYS A:174BINDING SITE FOR RESIDUE CO3 A 912
13BC4SOFTWAREMET A:132BINDING SITE FOR RESIDUE PD A 914

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4Q9X)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Ala A:48 -Pro A:49
2Phe A:83 -Pro A:84

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Q9X)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Q9X)

(-) Exons   (0, 0)

(no "Exon" information available for 4Q9X)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeeeeeeeeee..eeeeeeeeeeee....eeeeeeeeee.......hhhhhh...............hhhhhh....eeeeeeeee....eeeeeeeeeee..eeeeeeeeeee............eeee..eeeeeeee..eeeeeeeeeeee....eeeeeeeeeeee.........eeeeeeeeeeee.hhh.eeeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q9x A   2 GVIKPDMKIKLKMEGNVNGYAFVIEGEGEGKPYDGTNTINLEVKEGAPLPFSYDILTTAFaNRAFTKYPDDIPNYFKQSFPEGYSWERTMTFEDKGIVKVKSDISLEEDSFIYEIYLKGENFPPNGPVMQKKTTGWDASTERMYVRDGVLKGDVKHKLLLEGGGYYRVDFKTIYRAKKAVKLPDYHFVDHRIEILNYDKDYNKVTVYESAVARN 217
                                    11        21        31        41        51        61||      73        83        93       103       113       123       133       143       153       163       173       183       193       203       213    
                                                                                       62-PIA                                                                                                                                                     
                                                                                        65
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Q9X)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4Q9X)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Q9X)

(-) Gene Ontology  (3, 3)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GFPL_CLASP | Q9U6Y3: 2hqk 2otb 2ote 4q9w 4r6d

(-) Related Entries Specified in the PDB File

2hqk
4q9w MTFP* NATIVE