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(-) Description

Title :  LPOB C-TERMINAL DOMAIN FROM SALMONELLA ENTERICA (SEL-MET)
 
Authors :  D. T. King, N. C. J. Strynadka
Date :  23 Apr 14  (Deposition) - 14 May 14  (Release) - 23 Jul 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.97
Chains :  Asym./Biol. Unit :  A
Keywords :  Mixed Alpha-Beta, Lipoprotein, Activator Of Pbp1B, Pbp1B, Lipidation, Outer-Membrane, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. T. King, E. Lameignere, N. C. Strynadka
Structural Insights Into The Lipoprotein Outer Membrane Regulator Of Penicillin-Binding Protein 1B.
J. Biol. Chem. V. 289 19245 2014
PubMed-ID: 24808177  |  Reference-DOI: 10.1074/JBC.M114.565879

(-) Compounds

Molecule 1 - PENICILLIN-BINDING PROTEIN ACTIVATOR LPOB
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: LPOB C-TERMINAL DOMAIN
    Gene: LPOB, STM1207
    Organism Scientific: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM
    Organism Taxid: 99287
    Strain: LT2 / SGSC1412 / ATCC 700720
    Synonym: PBP ACTIVATOR LPOB

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric/Biological Unit (1, 5)
No.NameCountTypeFull Name
1MSE5Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 4Q6V)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4Q6V)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4Q6V)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4Q6V)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4Q6V)

(-) Exons   (0, 0)

(no "Exon" information available for 4Q6V)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:135
                                                                                                                                                                       
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh........eeee...eeee....hhhhhhhhhhhhhhhh...ee.hhhhhhhhhhhh.........hhhhhhhhhhhhh..eeeeeeeee.....eeeeeeee.....eeeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4q6v A  77 YDWNGAmQPLVSKmLQADGVTAGSVLLVDSVNNRTNGSLNANEATETLRNALANNGKFTLVSVQQLSmAKQQLGLSPQDSLGTRSKAIGIARNVGAQYVLYSSASGNVNAPALQmQLmLVQTGEIIWSGKGAVQQ 211
                                  | 86   |    96       106       116       126       136       146       156       166       176       186    |  196       206     
                                 83-MSE 90-MSE                                               144-MSE                                        191-MSE                
                                                                                                                                               194-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4Q6V)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4Q6V)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4Q6V)

(-) Gene Ontology  (7, 7)

Asymmetric/Biological Unit(hide GO term definitions)

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  4q6v
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        LPOB_SALTY | Q8ZQ08: 4q6l

(-) Related Entries Specified in the PDB File

4q6l 4q6z