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(-) Description

Title :  CRYSTAL STRUCTURE OF WILD TYPE HYPOCREA JECORINA CEL7A IN A MONOCLINIC CRYSTAL FORM
 
Authors :  A. B. Bodenheimer, M. J. Cuneo, P. D. Swartz, D. A. Myles, F. Meilleur
Date :  20 Feb 14  (Deposition) - 04 Mar 15  (Release) - 04 Mar 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Exoglucanase, Cellobiohydrolase I, Cellulase, Glycoside Hydrolase Family 7, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. M. Bodenheimer, M. J. Cuneo, P. D. Swartz, D. A. Myles, F. Meilleur
Crystal Structure Of Wild Type Hypocrea Jecorina Cel7A In A Monoclinic Crystal Form
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - EXOGLUCANASE 1
    Chains: A
    EC Number: 3.2.1.91
    Fragment: CATALYTIC DOMAIN (UNP RESIDUES 18-449)
    Organism Common: TRICHODERMA REESEI
    Organism Scientific: HYPOCREA JECORINA
    Organism Taxid: 431241
    Strain: QM6A
    Synonym: 1,4-BETA-CELLOBIOHYDROLASE, EXOCELLOBIOHYDROLASE I, CBHI, EXOGLUCANASE I

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 5)

Asymmetric/Biological Unit (4, 5)
No.NameCountTypeFull Name
1BEN1Ligand/IonBENZAMIDINE
2NAG2Ligand/IonN-ACETYL-D-GLUCOSAMINE
3PCA1Mod. Amino AcidPYROGLUTAMIC ACID
4SM1Ligand/IonSAMARIUM (III) ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLU A:295 , GLU A:325 , HOH A:604 , HOH A:621binding site for residue SM A 503
2AC2SOFTWAREARG A:251 , TRP A:376 , TYR A:381 , HOH A:867binding site for residue BEN A 504
3AC3SOFTWAREPRO A:159 , GLY A:269 , ASN A:270 , PRO A:314 , HOH A:889 , HOH A:938 , HOH A:951 , HOH A:959binding site for Mono-Saccharide NAG A 501 bound to ASN A 270
4AC4SOFTWAREASN A:384 , GLU A:385binding site for Mono-Saccharide NAG A 502 bound to ASN A 384

(-) SS Bonds  (10, 10)

Asymmetric/Biological Unit
No.Residues
1A:4 -A:72
2A:19 -A:25
3A:50 -A:71
4A:61 -A:67
5A:138 -A:397
6A:172 -A:210
7A:176 -A:209
8A:230 -A:256
9A:238 -A:243
10A:261 -A:331

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Tyr A:381 -Pro A:382

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4P1H)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4P1H)

(-) Exons   (0, 0)

(no "Exon" information available for 4P1H)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:432
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .ee.........eeeeeee.....eeeeeeeeee.hhhh.eee.......ee..ee......hhhhhhhheee...hhhhhhheeee..eeeee.eee...eee.eeeeeeee..ee.......eeeeeeee.......eeeeeeee................hhhhh.............ee..ee.....ee.......ee..eeee..eeeeeee....eeeeee.......eeee.hhhh.............................ee......ee....eeeeeee.....eeeeeee..eeee...eee..eee...hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhh...eeeeeeee.....hhhhhh.......................hhhhhhhhh...eeeeeeeeeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 4p1h A   1 xSACTLQSETHPPLTWQKCSSGGTCTQQTGSVVIDANWRWTHATNSSTNCYDGNTWSSTLCPDNETCAKNCCLDGAAYASTYGVTTSGNSLSIGFVTQSAQKNVGARLYLMASDTTYQEFTLLGNEFSFDVDVSQLPCGLNGALYFVSMDADGGVSKYPTNTAGAKYGTGYCDSQCPRDLKFINGQANVEGWEPSSNNANTGIGGHGSCCSEMDIWEANSISEALTPHPCTTVGQEICEGDGCGGTYSDNRYGGTCDPDGCDWNPYRLGNTSFYGPGSSFTLDTTKKLTVVTQFETSGAINRYYVQNGVTFQQPNAELGSYSGNELNDDYCTAEEAEFGGSSFSDKGGLTQFKKATSGGMVLVMSLWDDYYANMLWLDSTYPTNETSSTPGAVRGSCSTSSGVPAQVESQSPNAKVTFSNIKFGPIGSTGNP 432
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430  
                            |                                                                                                                                                                                                                                                                                                                                                                                                                                               
                            1-PCA
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4P1H)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4P1H)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4P1H)

(-) Gene Ontology  (10, 10)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Tyr A:381 - Pro A:382   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GUX1_HYPJE | P62694: 1az6 1azh 1azj 1azk 1cbh 1cel 1dy4 1egn 1q2b 1q2e 2cbh 2cel 2mwj 2mwk 2v3i 2v3r 3cel 4c4c 4c4d 4cel 4d5i 4d5j 4d5o 4d5p 4d5q 4d5v 4p1j 4uwt 4v0z 5cel 5x34 5x35 5x36 5x37 5x38 5x39 5x3c 6cel 7cel 8cel

(-) Related Entries Specified in the PDB File

4p1j 4p1s