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(-) Description

Title :  THE CRYSTAL STRUCTURE OF NON-LEE ENCODED TYPE III EFFECTOR C FROM CITROBACTER RODENTIUM
 
Authors :  C. Chang, X. Xu, H. Cui, A. Savchenko, J. Adkins, A. Joachimiak, Midwest For Structural Genomics (Mcsg), Program For The Characteriza Secreted Effector Proteins (Pcsep)
Date :  17 Dec 13  (Deposition) - 15 Jan 14  (Release) - 07 May 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Type 3 Effector, Psi-Biology, Midwest Center For Structural Genomics, Mcsg, Hydrolase, Program For The Characterization Of Secreted Effector Proteins, Pcsep (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Chang, X. Xu, H. Cui, A. Savchenko, J. Adkins, A. Joachimiak
The Crystal Structure Of Non-Lee Encoded Type Iii Effector From Citrobacter Rodentium
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - NON-LEE ENCODED TYPE III EFFECTOR C
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: NLEC
    Organism Scientific: CITROBACTER RODENTIUM
    Organism Taxid: 67825

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 10)

Asymmetric Unit (2, 10)
No.NameCountTypeFull Name
1MSE8Mod. Amino AcidSELENOMETHIONINE
2ZN2Ligand/IonZINC ION
Biological Unit 1 (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
2ZN-1Ligand/IonZINC ION
Biological Unit 2 (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE
2ZN-1Ligand/IonZINC ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS A:183 , HIS A:187 , ASP A:194 , TYR A:227 , HOH A:561BINDING SITE FOR RESIDUE ZN A 401
2AC2SOFTWAREHIS B:183 , HIS B:187 , ASP B:194 , HOH B:525BINDING SITE FOR RESIDUE ZN B 401

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4O2I)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4O2I)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 4O2I)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:260
                                                                                                                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhheee..eee.........hhhhhhhhhhhhh......eee..eeee.....eeee..........hhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh.......hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o2i A  22 VAPNRSDNAYADYVLDIGKRIPLSAEDLGNLYENVIRAVRDSRSKLIDQHTVDmIGNTILDALSRSQTFRDAVSYGIHNKEVHIGCIKYRNEYELNGESPVKVDDIQSLTCTELYEYDVGQEPILPICEAGENDNEEPYVSFSVAPDTDSYEmPSWQEGLIHEIIHHVTGASDPSGDSNIELGPTEILARRVAQELGWTVPDFIGYAEPDREAHLRGRNLNALRQAAmRHEDNERTFFERLGmISDRYEASPDFTEYSAV 281
                                    31        41        51        61        71   |    81        91       101       111       121       131       141       151       161       171  |    181       191       201       211       221       231       241       251       261  |    271       281
                                                                                75-MSE                                                                                            174-MSE                                                                    249-MSE        264-MSE             


Chain B from PDB  Type:PROTEIN  Length:238
                                                                                                                                                                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh..hhhhhhhhhh....hhhhheee..eee.........hhhhhhhh......eee..eeee.....eeee..........hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh........... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4o2i B  26 RSDNAYADYVLDIGKRIPLSALGNLYENVIRAVRDSRSKLIDQHTVDmIGNTILDALSRSQTFRDAVSYGIHNKEVHIGCIKYRNEYELNGESDIQSLTCTELYEYDVGQEPILPICEAGENDNEEPYVSFSVAPDTDSYEmPSWQEGLIHEIIHHVTGASDPSELGPTEILARRVAQELGWTVPDFAEPDREAHLRGRNLNALRQAAmRHEDNERTFFERLGmISDRYEASPDFTEY 278
                                    35        45||      57        67       |77        87        97       107       117  ||   132       142       152       162       172 |     182       192   ||  207       217      |230       240       250       260   |   270        
                                               46|                        75-MSE                                      120|                                             174-MSE               196|                   224|                  249-MSE        264-MSE          
                                                49                                                                     126                                                                    202                    228
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4O2I)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (1, 1)

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