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(-) Description

Title :  CRYSTAL STRUCTURE OF MYCOBACTERIAL FTSX EXTRACELLULAR DOMAIN
 
Authors :  D. Mavrici
Date :  17 Oct 13  (Deposition) - 28 May 14  (Release) - 16 Jul 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.87
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Cell Wall, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Mavrici, M. J. Marakalala, J. M. Holton, D. M. Prigozhin, C. L. Gee, Y. J. Zhang, E. J. Rubin, T. Alber
Mycobacterium Tuberculosis Ftsx Extracellular Domain Activates The Peptidoglycan Hydrolase, Ripc.
Proc. Natl. Acad. Sci. Usa V. 111 8037 2014
PubMed-ID: 24843173  |  Reference-DOI: 10.1073/PNAS.1321812111

(-) Compounds

Molecule 1 - CELL DIVISION PROTEIN FTSX
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 45-157
    Gene: FTSX, MT3185, MTCY164.12C, RV3101C
    Organism Scientific: MYCOBACTERIUM TUBERCULOSIS
    Organism Taxid: 83332
    Strain: H37RV

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric Unit (1, 2)
No.NameCountTypeFull Name
1K2Ligand/IonPOTASSIUM ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1K-1Ligand/IonPOTASSIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLN B:146 , GLN C:146 , HOH C:233 , HOH C:306 , HOH C:312BINDING SITE FOR RESIDUE K B 201
2AC2SOFTWAREHOH A:283 , MET D:143 , LYS D:144 , GLN D:146 , VAL D:149 , HOH D:354BINDING SITE FOR RESIDUE K D 201

(-) SS Bonds  (4, 4)

Asymmetric Unit
No.Residues
1A:73 -A:78
2B:73 -B:78
3C:73 -C:78
4D:73 -D:78

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4N8N)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4N8N)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4N8N)

(-) Exons   (0, 0)

(no "Exon" information available for 4N8N)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:102
                                                                                                                                      
               SCOP domains ------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .....eeeeehhhhhh......hhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhhhhh........eeeeee.hhhhhhhhhhhhhh...eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------ Transcript
                 4n8n A  53 LDRVESQVFLTEDVSANDSSCDTTACKALREKIETRSDVKAVRFLNRQQAYDDAIRKFPQFKDVAGKDSFPASFIVKLENPEQHKDFDTAMKGQPGVLDVLN 154
                                    62        72        82        92       102       112       122       132       142       152  


Chain B from PDB  Type:PROTEIN  Length:103
                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhh.eeeeehhhhhh......hhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhhh...hhhhh..eeeeee.....hhhhhhhhhh...eeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------- Transcript
                 4n8n B  52 YLDRVESQVFLTEDVSANDSSCDTTACKALREKIETRSDVKAVRFLNRQQAYDDAIRKFPQFKDVAGKDSFPASFIVKLENPEQHKDFDTAMKGQPGVLDVLN 154
                                    61        71        81        91       101       111       121       131       141       151   


Chain C from PDB  Type:PROTEIN  Length:99
                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeehhhhhhhh....hhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhhhhh.hhhhh..eeeeee.....hhhhhhhhhh...eeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------- Transcript
                 4n8n C  56 VESQVFLTEDVSANDSSCDTTACKALREKIETRSDVKAVRFLNRQQAYDDAIRKFPQFKDVAGKDSFPASFIVKLENPEQHKDFDTAMKGQPGVLDVLN 154
                                    65        75        85        95       105       115       125       135       145         


Chain D from PDB  Type:PROTEIN  Length:99
                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeehhhhhhhh....hhhhhhhhhhhhh...eeeeeeehhhhhhhhhhhhhhhhh...hhhhh..eeeeee.....hhhhhhhhhh...eeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------- Transcript
                 4n8n D  56 VESQVFLTEDVSANDSSCDTTACKALREKIETRSDVKAVRFLNRQQAYDDAIRKFPQFKDVAGKDSFPASFIVKLENPEQHKDFDTAMKGQPGVLDVLN 154
                                    65        75        85        95       105       115       125       135       145
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4N8N)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4N8N)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4N8N)

(-) Gene Ontology  (10, 10)

Asymmetric Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        FTSX_MYCTU | P9WG19: 4n8o

(-) Related Entries Specified in the PDB File

4n8o