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(-) Description

Title :  CRYSTAL STRUCTURE OF PORCINE C2 DOMAIN OF BLOOD COAGULATION FACTOR VIII
 
Authors :  P. C. Spiegel, C. Brison
Date :  11 Sep 13  (Deposition) - 06 Nov 13  (Release) - 06 Nov 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym./Biol. Unit :  M
Keywords :  Blood Coagulation Domain, Blood Clotting (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. C. Spiegel, C. Brison
Crystal Structure Of Porcine C2 Domain Of Blood Coagulation Factor Viii (Foldit Target)
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - COAGULATION FACTOR VIII
    Chains: M
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: C2 DOMAIN (UNP RESIDUES 1971-2129)
    Gene: F8, CF8
    Organism Common: PIG
    Organism Scientific: SUS SCROFA
    Organism Taxid: 9823
    Synonym: PROCOAGULANT COMPONENT

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : M

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREPHE M:2200 , SER M:2250BINDING SITE FOR RESIDUE GOL M 2401

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1M:2174 -M:2326

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Asp M:2298 -Pro M:2299

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4MO3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4MO3)

(-) Exons   (0, 0)

(no "Exon" information available for 4MO3)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain M from PDB  Type:PROTEIN  Length:156
                                                                                                                                                                                             
               SCOP domains d4mo3m_ M: automated matches                                                                                                                                 SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...ee........hhh.eee...........hhhhh.....................eeeeeeeeeeeeeeeee.eee..eeeeeeeeeeeee......ee.ee..ee..ee........eeeeeeeeeeeeeeeeeeeeee.....eeeeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                4mo3 M 2173 SCSMPLGMQNKAISDSQITASSHLSNIFATWSPSQARLHLQGRTNAWRPRVSSAEEWLQVDLQKTVKVTGITTQGVKSLLSSMYVKEFLVSSSQDGRRWTLFLQDGHTKVFQGNQDSSTPVVNALDPPLFTRYLRIHPTSWAQHIALRLEVLGCEA 2329
                                  2182      2192      2202      2212      2222      2232      2242      2252      2262      2272      2282      2292      2302      2312      2322    ||
                                                                                                                                                                                   2327|
                                                                                                                                                                                    2329
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4MO3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4MO3)

(-) Gene Ontology  (10, 10)

Asymmetric/Biological Unit(hide GO term definitions)

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