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(-) Description

Title :  CRYSTAL STRUCTURE OF ENOYL-ACYL CARRIER PROTEIN REDUCTASE (FABI) FROM NEISSERIA MENINGITIDIS IN COMPLEX WITH NAD+ AND TRICLOSAN
 
Authors :  J. D. Nanson, J. K. Forwood
Date :  13 Aug 13  (Deposition) - 02 Oct 13  (Release) - 02 Oct 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A,B  (2x)
Keywords :  Enoyl, Acyl Carrier Protein, Acp, Neisseria, Inhibitor, Rossmann Fold, Reductase, Nad, Triclosan, Oxidoreductase-Antibiotic Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. D. Nanson, J. K. Forwood
Crystal Structure Of Enoyl-Acyl Carrier Protein Reductase (Fabi) From Neisseria Meningitidis In Complex With Nad+ And Triclosan
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH]
    Chains: A, B
    EC Number: 1.3.1.9
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: FABI, NMC1834
    Organism Scientific: NEISSERIA MENINGITIDIS
    Organism Taxid: 272831
    Strain: FAM18

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (2x): AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 4)

Asymmetric Unit (2, 4)
No.NameCountTypeFull Name
1NAD2Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
2TCL2Ligand/IonTRICLOSAN
Biological Unit 1 (2, 8)
No.NameCountTypeFull Name
1NAD4Ligand/IonNICOTINAMIDE-ADENINE-DINUCLEOTIDE
2TCL4Ligand/IonTRICLOSAN

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:13 , ILE A:15 , SER A:19 , ILE A:20 , VAL A:40 , CYS A:63 , ASP A:64 , VAL A:65 , SER A:91 , ILE A:92 , GLY A:93 , ILE A:119 , LEU A:145 , SER A:146 , LYS A:164 , ALA A:190 , GLY A:191 , PRO A:192 , ILE A:193 , THR A:195 , LEU A:196 , ALA A:197 , TCL A:302 , HOH A:401 , HOH A:402 , HOH A:412 , HOH A:423 , HOH A:433 , HOH A:449 , HOH A:451BINDING SITE FOR RESIDUE NAD A 301
2AC2SOFTWAREGLY A:93 , ALA A:95 , LEU A:100 , TYR A:147 , TYR A:157 , LYS A:164 , ALA A:197 , ILE A:201 , NAD A:301BINDING SITE FOR RESIDUE TCL A 302
3AC3SOFTWAREGLY B:13 , ILE B:15 , SER B:19 , ILE B:20 , VAL B:40 , CYS B:63 , ASP B:64 , VAL B:65 , SER B:91 , ILE B:92 , GLY B:93 , ILE B:119 , LEU B:145 , SER B:146 , TYR B:147 , LYS B:164 , ALA B:190 , GLY B:191 , PRO B:192 , ILE B:193 , THR B:195 , LEU B:196 , ALA B:197 , TCL B:302 , HOH B:410 , HOH B:414 , HOH B:431 , HOH B:448 , HOH B:472 , HOH B:488 , HOH B:538BINDING SITE FOR RESIDUE NAD B 301
4AC4SOFTWAREGLY B:93 , ALA B:95 , LEU B:100 , TYR B:147 , TYR B:157 , LYS B:164 , ALA B:197 , ALA B:198 , ILE B:201 , NAD B:301BINDING SITE FOR RESIDUE TCL B 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4M89)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4M89)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4M89)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4M89)

(-) Exons   (0, 0)

(no "Exon" information available for 4M89)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:257
                                                                                                                                                                                                                                                                                                 
               SCOP domains d4m89a_ A: automated matches                                                                                                                                                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee.......hhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhh....eee....hhhhhhhhhhhhh.......eeee.....hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhh......hhhhhhhhhhhhhhhhhhhhhh...eeeeeeee.....hhhhhh.hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.....eeee..hhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m89 A   2 GFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALS 258
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       


Chain B from PDB  Type:PROTEIN  Length:257
                                                                                                                                                                                                                                                                                                 
               SCOP domains d4m89b_ B: automated matches                                                                                                                                                                                                                                      SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee.......hhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhh....eee....hhhhhhhhhhhhh.......eeee.....hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeehhhhh......hhhhhhhhhhhhhhhhhhhhhh...eeeeeeee.....hhhhhh.hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhh.....eeee..hhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m89 B   2 GFLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTIEEVGNTAAFLLSDLSSGITGEITYVDGGYSINALS 258
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4M89)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4M89)

(-) Gene Ontology  (5, 5)

Asymmetric Unit(hide GO term definitions)

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  4m89
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  1.3.1.9
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        A1KVU8_NEIMF | A1KVU8: 4m86 4m87

(-) Related Entries Specified in the PDB File

4m86 THE SAME PROTEIN IN UNBOUND FORM
4m87 THE SAME PROTEIN IN COMPLEX WITH NAD+