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(-) Description

Title :  DIMER OF THE G-SEGMENT INVERTASE BOUND TO A DNA SUBSTRATE
 
Authors :  C. J. Ritacco, J. Wang, T. A. Steitz
Date :  09 Aug 13  (Deposition) - 12 Mar 14  (Release) - 02 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  4.99
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Helix-Turn-Helix, Catalytic Domain, Dna Binding Domain, Recombinase, Hydrolase-Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. J. Ritacco, T. A. Steitz, J. Wang
Exploiting Large Non-Isomorphous Differences For Phase Determination Of A G-Segment Invertase-Dna Complex.
Acta Crystallogr. , Sect. D V. 70 685 2014
PubMed-ID: 24598738  |  Reference-DOI: 10.1107/S1399004713032392

(-) Compounds

Molecule 1 - DNA-INVERTASE
    Chains: A
    Organism Scientific: ENTEROBACTERIA PHAGE MU
    Organism Taxid: 10677
 
Molecule 2 - GIX SITE ANALOG
    Chains: B
    Engineered: YES
    Other Details: IDT DNA
    Synthetic: YES
 
Molecule 3 - GIX SITE ANALOG
    Chains: C
    Engineered: YES
    Other Details: IDT DNA
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4M6F)

(-) Sites  (0, 0)

(no "Site" information available for 4M6F)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4M6F)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4M6F)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4M6F)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4M6F)

(-) Exons   (0, 0)

(no "Exon" information available for 4M6F)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:188
                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................hhhhh......................hhhhh....................hhhhhhhhhh....................hhhhh.......hhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhh.................................... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4m6f A   2 LIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTRTDRPGLKRALKRLQKGDTLVVWKLDRLGRSMKHLISLVGELRERGINFRSLTDSIDTSSPMGRFFFHVMGALAEVERELIIERTMAGLAAARNKGRIGGRPPKLTKAEQEQAGRLLAQGIPRKQVALIYDVALSTLYKKHPAKRAHIEND 189
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181        


Chain B from PDB  Type:DNA  Length:17
                                                 
                 4m6f B   1 AAGTTTTTGATAAGTTT  17
                                    10       


Chain C from PDB  Type:DNA  Length:18
                                                  
                 4m6f C  14 AAAACTTATCAAAAACTT  31
                                    23
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4M6F)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4M6F)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4M6F)

(-) Gene Ontology  (8, 8)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GIN_BPMU | P03015: 3uj3

(-) Related Entries Specified in the PDB File

1gdt 3pkz 3uj3