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(-) Description

Title :  THE STRUCTURE OF ACIDOTHERMUS CELLULOLYTICUS FAMILY 74 GLYCOSIDE HYDROLASE
 
Authors :  P. M. Alahuhta, V. V. Lunin
Date :  28 Jun 13  (Deposition) - 11 Dec 13  (Release) - 15 Jan 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.82
Chains :  Asym./Biol. Unit :  A
Keywords :  Gh74, Xyloglucanase, Cellulose Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  M. Alahuhta, W. S. Adney, M. E. Himmel, V. V. Lunin
Structure Of Acidothermus Cellulolyticus Family 74 Glycosid Hydrolase At 1. 82 Angstrom Resolution.
Acta Crystallogr. , Sect. F V. 69 1335 2013
PubMed-ID: 24316824  |  Reference-DOI: 10.1107/S1744309113030005

(-) Compounds

Molecule 1 - CELLULOSE-BINDING, FAMILY II
    ChainsA
    EngineeredYES
    Expression SystemESCHERICHIA COLI
    Expression System Taxid562
    FragmentUNP RESIDUES 47-786
    GeneACEL_0618
    Organism ScientificACIDOTHERMUS CELLULOLYTICUS
    Organism Taxid351607
    StrainATCC 43068 / 11B

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (6, 36)

Asymmetric/Biological Unit (6, 36)
No.NameCountTypeFull Name
1ACT3Ligand/IonACETATE ION
2EDO16Ligand/Ion1,2-ETHANEDIOL
3FMT4Ligand/IonFORMIC ACID
4GOL4Ligand/IonGLYCEROL
5K3Ligand/IonPOTASSIUM ION
6NA6Ligand/IonSODIUM ION

(-) Sites  (36, 36)

Asymmetric Unit (36, 36)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:249 , TYR A:256 , PRO A:311 , HOH A:1636BINDING SITE FOR RESIDUE K A 801
02AC2SOFTWARESER A:438 , TYR A:481 , HOH A:985 , HOH A:1503BINDING SITE FOR RESIDUE K A 802
03AC3SOFTWAREGLU A:429 , EDO A:809 , HOH A:1018 , HOH A:1285BINDING SITE FOR RESIDUE K A 803
04AC4SOFTWAREASN A:11 , TYR A:704 , ARG A:728 , EDO A:812 , HOH A:1102 , HOH A:1230 , HOH A:1276BINDING SITE FOR RESIDUE EDO A 804
05AC5SOFTWAREGLY A:60 , TRP A:61 , ASN A:62 , THR A:682 , GLN A:703 , HOH A:1241 , HOH A:1549BINDING SITE FOR RESIDUE EDO A 805
06AC6SOFTWAREGLY A:236 , TRP A:283 , HOH A:1170 , HOH A:1944BINDING SITE FOR RESIDUE EDO A 806
07AC7SOFTWARESER A:564 , GLN A:565 , GLY A:566 , VAL A:567 , HOH A:1448 , HOH A:1595BINDING SITE FOR RESIDUE EDO A 807
08AC8SOFTWAREASN A:218 , ARG A:353 , TRP A:413 , ASP A:414 , HOH A:1008 , HOH A:1606BINDING SITE FOR RESIDUE EDO A 808
09AC9SOFTWAREVAL A:425 , LYS A:426 , GLY A:427 , GLU A:429 , VAL A:463 , K A:803 , HOH A:1171BINDING SITE FOR RESIDUE EDO A 809
10BC1SOFTWAREGLU A:521 , SER A:560 , TRP A:561 , THR A:640 , HOH A:941 , HOH A:1688 , HOH A:2012BINDING SITE FOR RESIDUE EDO A 810
11BC2SOFTWARETRP A:58 , THR A:109 , TRP A:110 , HOH A:1316 , HOH A:1915BINDING SITE FOR RESIDUE EDO A 811
12BC3SOFTWAREASP A:57 , GLN A:701 , HIS A:702 , EDO A:804 , HOH A:1276BINDING SITE FOR RESIDUE EDO A 812
13BC4SOFTWAREARG A:686 , SER A:687 , ASP A:688 , ASP A:689 , THR A:693BINDING SITE FOR RESIDUE EDO A 813
14BC5SOFTWAREASN A:261 , THR A:262 , ASP A:267 , GLY A:268 , SER A:269 , HOH A:1551BINDING SITE FOR RESIDUE EDO A 814
15BC6SOFTWAREPRO A:622 , GLY A:661 , HOH A:1349 , HOH A:1503 , HOH A:1727 , HOH A:2014 , HOH A:2015BINDING SITE FOR RESIDUE EDO A 815
16BC7SOFTWAREGLN A:5 , PRO A:6 , TYR A:7 , TRP A:9 , ILE A:697 , ASP A:699 , HIS A:702 , HOH A:1303 , HOH A:1523 , HOH A:1533 , HOH A:1686BINDING SITE FOR RESIDUE EDO A 816
17BC8SOFTWAREPRO A:169 , ASP A:170 , VAL A:171BINDING SITE FOR RESIDUE EDO A 817
18BC9SOFTWARELYS A:275 , ILE A:286 , GLY A:334 , ALA A:336 , HOH A:1739BINDING SITE FOR RESIDUE EDO A 818
19CC1SOFTWAREHIS A:638 , TYR A:669 , GLY A:690BINDING SITE FOR RESIDUE EDO A 819
20CC2SOFTWARETYR A:481 , ARG A:577 , ALA A:620 , PRO A:622 , HOH A:985 , HOH A:1161 , HOH A:1377 , HOH A:1398 , HOH A:1503BINDING SITE FOR RESIDUE GOL A 820
21CC3SOFTWAREGLY A:28 , PRO A:76 , SER A:634 , GLY A:635 , TYR A:637 , HOH A:984 , HOH A:1240 , HOH A:1427 , HOH A:1777 , HOH A:1906 , HOH A:1918BINDING SITE FOR RESIDUE GOL A 821
22CC4SOFTWAREASP A:435 , LEU A:436 , MET A:617 , HIS A:619 , ASN A:657 , GLN A:709 , ALA A:710 , ILE A:711 , HOH A:1015 , HOH A:1168 , HOH A:1587 , HOH A:1896 , HOH A:2010BINDING SITE FOR RESIDUE GOL A 822
23CC5SOFTWAREPRO A:114 , PRO A:116 , THR A:161 , TRP A:162 , HOH A:1363 , HOH A:1912 , HOH A:2016 , HOH A:2017BINDING SITE FOR RESIDUE GOL A 823
24CC6SOFTWARESER A:359 , PRO A:362 , VAL A:463 , HOH A:1351 , HOH A:1457BINDING SITE FOR RESIDUE ACT A 824
25CC7SOFTWAREPRO A:444 , ASP A:714 , ARG A:716 , ILE A:717 , HOH A:1148 , HOH A:1243 , HOH A:1633BINDING SITE FOR RESIDUE ACT A 825
26CC8SOFTWAREALA A:406 , ASN A:408 , HIS A:420 , HOH A:990 , HOH A:1227 , HOH A:1371BINDING SITE FOR RESIDUE ACT A 826
27CC9SOFTWARESER A:663 , ALA A:664 , SER A:667 , HOH A:1428 , HOH A:1652 , HOH A:1740BINDING SITE FOR RESIDUE NA A 827
28DC1SOFTWAREASP A:38 , HOH A:914 , HOH A:1186 , HOH A:1288BINDING SITE FOR RESIDUE NA A 828
29DC2SOFTWAREGLY A:268 , TYR A:298 , ILE A:320 , HOH A:955 , HOH A:1551 , HOH A:1795BINDING SITE FOR RESIDUE NA A 829
30DC3SOFTWARESER A:587 , ASN A:588 , THR A:590 , HOH A:1874 , HOH A:1900BINDING SITE FOR RESIDUE NA A 830
31DC4SOFTWAREASN A:588 , HOH A:1406 , HOH A:1900 , HOH A:2013 , HOH A:2018BINDING SITE FOR RESIDUE NA A 831
32DC5SOFTWAREASP A:187 , HOH A:1188 , HOH A:1514 , HOH A:1600BINDING SITE FOR RESIDUE NA A 832
33DC6SOFTWAREARG A:154 , SER A:155 , THR A:156 , ASP A:157 , THR A:161 , SER A:163BINDING SITE FOR RESIDUE FMT A 833
34DC7SOFTWAREARG A:154 , GLY A:227 , GLY A:228 , ALA A:229 , HOH A:1128BINDING SITE FOR RESIDUE FMT A 834
35DC8SOFTWARELEU A:352 , TYR A:354 , VAL A:355 , LEU A:356 , HOH A:1098 , HOH A:1164BINDING SITE FOR RESIDUE FMT A 835
36DC9SOFTWARETHR A:365 , GLN A:369 , HOH A:1790 , HOH A:1824BINDING SITE FOR RESIDUE FMT A 836

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4LGN)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric/Biological Unit
No.Residues
1Gly A:129 -Glu A:130
2Gly A:264 -Pro A:265
3Gln A:319 -Ile A:320
4Trp A:323 -Pro A:324
5Tyr A:347 -Pro A:348
6Pro A:372 -Pro A:373
7Ser A:376 -Pro A:377
8Ser A:470 -Pro A:471

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4LGN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4LGN)

(-) Exons   (0, 0)

(no "Exon" information available for 4LGN)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:739
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeee........eeeeee.......eeeee....eeeee....eeee........hhhhh.eeeeee.......eeeee............eeeee.......eeee.................eee.......eeee......eeee.......ee..........................eeeeee.hhhh........eeeee......eeee.......ee........eeeeeeee....eeeeeee............eeeee.....eee..............eeeeeee.......eeeeee........eeee.......ee.eee.....eee.eee....hhhhhh...................eee.......eeee....eeee.hhhhhhhh..eeeee.........eeeee.......eeeee...eeeee.................eeeeeee.......eeeeee.hhhhh.....eeee....................eeee......eeee........eee.......ee........eeee.......eeeee..eeeee.......eeee...........eeee.......eeeee..eeeee.......ee...eeeeeeeeee.........eeeeeeee..eeeeeee.......ee..............eeee..eeeeeeee.....eeeeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lgn A   3 TTQPYTWSNVAIGGGGFVDGIVFNEGAPGILYVRTDIGGMYRWDAANGRWIPLLDWVGWNNWGYNGVVSIAADPINTNKVWAAVGMYTNSWDPNDGAILRSSDQGATWQITPLPFKLGGNMPGRGMGERLAVDPNNDNILYFGAPSGKGLWRSTDSGATWSQMTNFPDVGTYIANPTDTTGYQSDIQGVVWVAFDKSSSSLGQASKTIFVGVADPNNPVFWSRDGGATWQAVPGAPTGFIPHKGVFDPVNHVLYIATSNTGGPYDGSSGDVWKFSVTSGTWTRISPVPSTDTANDYFGYSGLTIDRQHPNTIMVATQISWWPDTIIFRSTDGGATWTRIWDWTSYPNRSLRYVLDISAEPWLTFGVQPNPPVPSPKLGWMDEAMAIDPFNSDRMLYGTGATLYATNDLTKWDSGGQIHIAPMVKGLEETAVNDLISPPSGAPLISALGDLGGFTHADVTAVPSTIFTSPVFTTGTSVDYAELNPSIIVRAGSFDPSSQPNDRHVAFSTDGGKNWFQGSEPGGVTTGGTVAASADGSRFVWAPGDPGQPVVYAVGFGNSWAASQGVPANAQIRSDRVNPKTFYALSNGTFYRSTDGGVTFQPVAAGLPSSGAVGVMFHAVPGKEGDLWLAASSGLYHSTNGGSSWSAITGVSSAVNVGFGKSAPGSSYPAVFVVGTIGGVTGAYRSDDGGTTWVRINDDQHQYGNWGQAITGDPRIYGRVYIGTNGRGIVYGDIAGAPSG 741
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732         

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4LGN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4LGN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4LGN)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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