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(-) Description

Title :  STRUCTURE OF THE ALS3 ADHESIN FROM CANDIDA ALBICANS, RESIDUES 1-313 (MATURE SEQUENCE), TRIPLE MUTANT IN THE BINDING CAVITY: K59M, A116V, Y301F
 
Authors :  J. Lin, J. A. Garnett, E. Cota
Date :  25 Jun 13  (Deposition) - 14 May 14  (Release) - 16 Jul 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Adhesin, Peptide Binding Protein, Biofilm Formation, Cellular Adhesion, Peptides, Cell Surface, Cell Adhesion (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Lin, S. H. Oh, R. Jones, J. A. Garnett, P. S. Salgado, S. Rusnakova, S. J. Matthews, L. L. Hoyer, E. Cota
The Peptide-Binding Cavity Is Essential For Als3-Mediated Adhesion Of Candida Albicans To Human Cells.
J. Biol. Chem. V. 289 18401 2014
PubMed-ID: 24802757  |  Reference-DOI: 10.1074/JBC.M114.547877

(-) Compounds

Molecule 1 - AGGLUTININ-LIKE PROTEIN 3
    Chains: A, B, C, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET32 XA/LIC
    Expression System Strain: BL21 SHUFFLE
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Fragment: NT-ALS3 (N-TERMINAL DOMAIN, UNP RESIDUES 18-330)
    Gene: ALD8, ALS3
    Mutation: YES
    Organism Common: YEAST
    Organism Scientific: CANDIDA ALBICANS
    Organism Taxid: 5476
    Synonym: ALS3, 3D9 ANTIGEN, ADHESIN 3

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4LEE)

(-) Sites  (0, 0)

(no "Site" information available for 4LEE)

(-) SS Bonds  (14, 14)

Asymmetric Unit
No.Residues
1A:56 -A:133
2A:79 -A:95
3A:188 -A:281
4A:210 -A:239
5B:56 -B:133
6B:79 -B:95
7B:188 -B:281
8B:210 -B:239
9C:56 -C:133
10C:188 -C:281
11D:56 -D:133
12D:79 -D:95
13D:188 -D:281
14D:210 -D:239

(-) Cis Peptide Bonds  (4, 4)

Asymmetric Unit
No.Residues
1Pro A:29 -Thr A:30
2Pro B:29 -Thr B:30
3Pro C:29 -Thr C:30
4Pro D:29 -Thr D:30

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4LEE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4LEE)

(-) Exons   (0, 0)

(no "Exon" information available for 4LEE)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:313
                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeee...............eeeeeeeeee........eeeeeee.eeee.....eee........eeeeee.......eeeeeeee.......eeeeeeeeeeeee......hhhhhhhh.....eeeeeeee....eeeeeeee..........eeeeeeehhhheeeeeee.......eeeeeeeee......eeeeeeeeeeeee..............eeeeee...eeeeeee.....eeeeeeeeee.....eeeeeeeeeeee....eee..eeeeee.......eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lee A   0 GKTITGVFNSFNSLTWSNAATYNYKGPGTPTWNAVLGWSLDGTSASPGDTFTLNMPCVFMFTTSQTSVDLTAHGVKYATCQFQAGEEFMTFSTLTCTVSNTLTPSIKALGTVTLPLVFNVGGTGSSVDLEDSKCFTAGTNTVTFNDGGKKISINVDFERSNVDPKGYLTDSRVIPSLNKVSTLFVAPQCANGYTSGTMGFANTYGDVQIDCSNIHVGITKGLNDWNYPVSSESFSYTKTCSSNGIFITYKNVPAGYRPFVDAYISATDVNSYTLSYANEYTCAGGYWQRAPFTLRWTGFRNSDAGSNGIVIVA 312
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309   


Chain B from PDB  Type:PROTEIN  Length:313
                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeee...............eeeeeeeeee........eeeeeee.eee......eeee.......eeeeee.......eeeeeeee.......eeeeeeeeeeeee......hhhhhhhh.....eeeeeeee....eeeeeeee..........eeeeeee....eeeeeee.......eeeeeeeeee.....eeeeeeeeeeeee..............eeeeee...eeeeeeeee...eeeeeeeeee.....eeeeeee.eeee...eeee..eeeeee.......eeeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lee B   0 GKTITGVFNSFNSLTWSNAATYNYKGPGTPTWNAVLGWSLDGTSASPGDTFTLNMPCVFMFTTSQTSVDLTAHGVKYATCQFQAGEEFMTFSTLTCTVSNTLTPSIKALGTVTLPLVFNVGGTGSSVDLEDSKCFTAGTNTVTFNDGGKKISINVDFERSNVDPKGYLTDSRVIPSLNKVSTLFVAPQCANGYTSGTMGFANTYGDVQIDCSNIHVGITKGLNDWNYPVSSESFSYTKTCSSNGIFITYKNVPAGYRPFVDAYISATDVNSYTLSYANEYTCAGGYWQRAPFTLRWTGFRNSDAGSNGIVIVA 312
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309   


Chain C from PDB  Type:PROTEIN  Length:313
                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeee...............eeeeeeeeee........eeeeeee.eeee.....eeeeee..eeeeeeeee.......eeeeeeee.......eeeeeeeeeeeee......hhhhhhhh.....eeeeeeeee..eeeeeeeee..........eee..eehhhheeeeeee.......eeeeeeeeee.....eeeeeeeeeeeee..........ee.....eee...eeeeeee.....eeeeeeeeee.....eeeeeeeeeeee....eee..eeeeee........eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lee C   0 GKTITGVFNSFNSLTWSNAATYNYKGPGTPTWNAVLGWSLDGTSASPGDTFTLNMPCVFMFTTSQTSVDLTAHGVKYATCQFQAGEEFMTFSTLTCTVSNTLTPSIKALGTVTLPLVFNVGGTGSSVDLEDSKCFTAGTNTVTFNDGGKKISINVDFERSNVDPKGYLTDSRVIPSLNKVSTLFVAPQCANGYTSGTMGFANTYGDVQIDCSNIHVGITKGLNDWNYPVSSESFSYTKTCSSNGIFITYKNVPAGYRPFVDAYISATDVNSYTLSYANEYTCAGGYWQRAPFTLRWTGFRNSDAGSNGIVIVA 312
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309   


Chain D from PDB  Type:PROTEIN  Length:313
                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eeeeeeeee...............eeeeeeeeee........eeeeeee.eeee.....eeeeee..eeeeeeeee.......eeeeeeee.......eeeeeeeeeeeee......hhhhhhhh......eeeeeeee..eeeeeeee...........eeeeeee....eeeeeee.......eeeeeeeeee......eeeeeeeeeee................eee.....eeeeee.......eeeeeeee......eeeeeeeeeeee....eee..eeeeee........eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4lee D   0 GKTITGVFNSFNSLTWSNAATYNYKGPGTPTWNAVLGWSLDGTSASPGDTFTLNMPCVFMFTTSQTSVDLTAHGVKYATCQFQAGEEFMTFSTLTCTVSNTLTPSIKALGTVTLPLVFNVGGTGSSVDLEDSKCFTAGTNTVTFNDGGKKISINVDFERSNVDPKGYLTDSRVIPSLNKVSTLFVAPQCANGYTSGTMGFANTYGDVQIDCSNIHVGITKGLNDWNYPVSSESFSYTKTCSSNGIFITYKNVPAGYRPFVDAYISATDVNSYTLSYANEYTCAGGYWQRAPFTLRWTGFRNSDAGSNGIVIVA 312
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279       289       299       309
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4LEE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4LEE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4LEE)

(-) Gene Ontology  (7, 14)

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  Cis Peptide Bonds
    Pro A:29 - Thr A:30   [ RasMol ]  
    Pro B:29 - Thr B:30   [ RasMol ]  
    Pro C:29 - Thr C:30   [ RasMol ]  
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  4lee
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  ALS3_CANAL | Q59L12
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  ALS3_CANAX | O74623
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ALS3_CANAL | Q59L12: 4le8 4leb
        ALS3_CANAX | O74623: 4le8 4leb

(-) Related Entries Specified in the PDB File

4le8 STRUCTURE OF THE ALS3 ADHESIN FROM CANDIDA ALBICANS, RESIDUES 1-299 (MATURE SEQUENCE)
4leb STRUCTURE OF THE ALS3 ADHESIN FROM CANDIDA ALBICANS, RESIDUES 1-299 (MATURE SEQUENCE) IN COMPLEX WITH HEPTA- THREONINE