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(-) Description

Title :  CRYSTAL STRUCTURE OF THE RANBD1 FOURTH DOMAIN OF E3 SUMO-PROTEIN LIGASE RANBP2. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) TARGET HR9193B
 
Authors :  S. Vorobiev, M. Su, J. Seetharaman, L. Mao, R. Xiao, M. Maglaqui, S. Koga J. K. Everett, T. B. Acton, G. T. Montelione, J. F. Hunt, L. Tong, Northe Structural Genomics Consortium (Nesg)
Date :  12 Jun 13  (Deposition) - 26 Jun 13  (Release) - 26 Jun 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A
Keywords :  Structural Genomics, Psi-Biology, Protein Structure Initiative, Nesg, Ranbp2, Ranbd1, Northeast Structural Genomics Consortium, Ligase, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Vorobiev, M. Su, J. Seetharaman, L. Mao, R. Xiao, M. Maglaqui, S. Kogan, H. Wang, J. K. Everett, T. B. Acton, G. T. Montelione, J. F. Hunt, L. Tong
Crystal Structure Of The Ranbd1 Fourth Domain Of E3 Sumo-Protein Ligase Ranbp2.
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - E3 SUMO-PROTEIN LIGASE RANBP2
    Chains: A
    EC Number: 6.3.2.-, 5.2.1.8
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: HR9193B-2907-3050-15.1
    Expression System Strain: BL21(DE3)+ MAGIC
    Expression System Taxid: 469008
    Expression System Vector Type: PET15_NESG
    Fragment: RANBD1 4 DOMAIN (UNP RESIDUES 2907-3050)
    Gene: NUP358, RANBP2
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: 358 KDA NUCLEOPORIN, NUCLEAR PORE COMPLEX PROTEIN NUP358, NUCLEOPORIN NUP358, RAN-BINDING PROTEIN 2, RANBP2, P270, PUTATIVE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE, PPIASE, ROTAMASE

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric/Biological Unit (1, 4)
No.NameCountTypeFull Name
1MSE4Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 4L6E)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4L6E)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
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(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:124
                                                                                                                                                             
               SCOP domains d4l6ea_ A: automated matches                                                                                                 SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeeeeeeeeeeeee....eeeeeeeeeeeeeee....eeeeeee......eeeeee.......ee......eeeeeeee......eeeeeeeee.hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------- Transcript
                4l6e A 2925 SGEEDEEILFKERAKLYRWDRDVSQWKERGVGDIKILWHTmKNYYRILmRRDQVFKVCANHVITKTmELKPLNVSNNALVWTASDYADGEAKVEQLAVRFKTKEVADCFKKTFEECQQNLmKLQ 3048
                                  2934      2944      2954      2964|     2974      2984      2994      3004      3014      3024      3034      3044|   
                                                                 2965-MSE   |              2991-MSE                                              3045-MSE
                                                                         2973-MSE
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: All beta proteins (24004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4L6E)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (39, 39)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RBP2_HUMAN | P49792: 1rrp 1xke 1z5s 2las 3uin 3uio 3uip 4ga0 4i9y 4lqw 5cll 5clq

(-) Related Entries Specified in the PDB File

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