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(-)Asym./Biol. Unit
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(-) Description

Title :  MSTING
 
Authors :  K. H. Chin, Y. C. Su, J. L. Tu, S. H. Chou
Date :  24 Apr 13  (Deposition) - 29 May 13  (Release) - 29 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Mouse Sting, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. H. Chin, Z. L. Tu, Y. C. Su, Y. J. Yu, H. C. Chen, Y. C. Lo, C. P. Chen, G. N. Barber, M. L. Chuah, Z. X. Liang, S. H. Chou
Novel C-Di-Gmp Recognition Modes Of The Mouse Innate Immune Adaptor Protein Sting
Acta Crystallogr. , Sect. D V. 69 352 2013
PubMed-ID: 23519410  |  Reference-DOI: 10.1107/S0907444912047269

(-) Compounds

Molecule 1 - STIMULATOR OF INTERFERON GENES PROTEIN
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: C-DI-GMP-BINDING DOMAIN (CBD), UNP RESIDUES 138-344
    Gene: TMEM173, ERIS MITA, MPYS, STING
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: MSTING, ENDOPLASMIC RETICULUM INTERFERON STIMULATOR, ERIS, MEDIATOR OF IRF3 ACTIVATION, MMITA, TRANSMEMBRANE PROTEIN 173

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4KC0)

(-) Sites  (0, 0)

(no "Site" information available for 4KC0)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4KC0)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4KC0)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4KC0)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4KC0)

(-) Exons   (0, 0)

(no "Exon" information available for 4KC0)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:182
                                                                                                                                                                                                                      
               SCOP domains d4kc0a_ A: automated matches                                                                                                                                                           SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh...........eeeeee...............eeeeee..................eeeeeee..eeeeeeeeee..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhheeeeee.........hhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4kc0 A 152 LNVAHGLAWSYYIGYLRLILPGLQARIRMFNQLHNNMLSGAGSRRLYILFPLDCGVPDNLSVVDPNIRFRDMLPQQNIDRAGIKNRVYSNSVYEILENGQPAGVCILEYATPLQTLFAMSQDAKSREDRLEQAKLFCRTLEEILEDVPESRNNCRLIVYQEPTDGNSFSLSQEVLRHIRQEE 336
                                   161       171       181       191       201       211       221       231       241       251       261       271   ||  284       294       304       314       324       334  
                                                                                                                                                     275|                                                         
                                                                                                                                                      279                                                         


Chain B from PDB  Type:PROTEIN  Length:178
                                                                                                                                                                                                                  
               SCOP domains d4kc0b_ B: automated matches                                                                                                                                                       SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh...........eeeeee...............eeeeee..................eeeeeee..eeeeeeeeee..hhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhheeeeee.........hhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4kc0 B 154 VAHGLAWSYYIGYLRLILPGLQARIRMFNQLHNNMLSGAGSRRLYILFPLDCGVPDNLSVVDPNIRFRDMLPQQNIDRAGIKNRVYSNSVYEILENGQPAGVCILEYATPLQTLFAMSQDAKREDRLEQAKLFCRTLEEILEDVPESRNNCRLIVYQEPTDGNSFSLSQEVLRHIRQE 335
                                   163       173       183       193       203       213       223       233       243       253       263       273 ||    287       297       307       317       327        
                                                                                                                                                   275|                                                       
                                                                                                                                                    280
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a+b) (23004)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4KC0)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4KC0)

(-) Gene Ontology  (34, 34)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        STING_MOUSE | Q3TBT3: 4jc5 4kby 4loj 4lok 4lol 4yp1

(-) Related Entries Specified in the PDB File

4kby