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(-) Description

Title :  CRYSTAL STRUCTURE OF LV-RANASPUMIN (LV-RSN-1) FROM THE FOAM NEST OF LEPTODACTYLUS VASTUS, ORTHORHOMBIC CRYSTAL FORM
 
Authors :  D. C. Hissa, G. A. Bezerra, V. M. M Melo, K. Gruber
Date :  17 Apr 13  (Deposition) - 05 Mar 14  (Release) - 05 Mar 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym./Biol. Unit :  A
Keywords :  Alpha-Helical, Surfactant Protein, Foam Nest, Frog, Amphibian, Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Cavalcante Hissa, G. Arruda Bezerra, R. Birner-Gruenberger, L. Paulino Silva, I. Uson, K. Gruber, V. M. Maciel Melo
Unique Crystal Structure Of A Novel Surfactant Protein From The Foam Nest Of The Frog Leptodactylus Vastus.
Chembiochem V. 15 393 2014
PubMed-ID: 24442854  |  Reference-DOI: 10.1002/CBIC.201300726

(-) Compounds

Molecule 1 - LV-RANASPUMIN (LV-RSN-1)
    Chains: A
    Organism Common: FROG
    Organism Scientific: LEPTODACTYLUS VASTUS
    Organism Taxid: 326589
    Other Details: FOAM NEST

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4K83)

(-) Sites  (0, 0)

(no "Site" information available for 4K83)

(-) SS Bonds  (4, 4)

Asymmetric/Biological Unit
No.Residues
1A:18 -A:67
2A:38 -A:114
3A:125 -A:168
4A:146 -A:207

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Glu A:79 -Glu A:80
2Leu A:81 -Leu A:82

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4K83)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4K83)

(-) Exons   (0, 0)

(no "Exon" information available for 4K83)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:203
                                                                                                                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh..hhhhhhhhhh..........hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhh..hhhhhhh.eeee..eeee...hhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4k83 A  13 GPGTACLTKALKDSGDLLVELAVIICAYQNGKDLQEQDFKELKELLERTLERAGCALDDIVADLGLEELLGSIGVSTGDIIQGLYKLLKELKIDETVFNAVCDVTKKMLDNKCLPKILQGDLVKFLKDLKYKVCIEGGDPELIIKDLKIILERLPCVLGGVGLDDLFKNIFVKDGILSFEGIAKPLGDLLILVLCPNVKNINV 215
                                    22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4K83)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4K83)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4K83)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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  Cis Peptide Bonds
    Glu A:79 - Glu A:80   [ RasMol ]  
    Leu A:81 - Leu A:82   [ RasMol ]  
 

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  4k83
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RANSP_LEPVA | P85507: 4k82

(-) Related Entries Specified in the PDB File

4k82 LV-RANASPUMIN (LV-RSN-1) FROM THE FOAM NEST OF LEPTODACTYLUS VASTUS, MONOCLINIC CRYSTAL FORM