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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN CLIC1 C24S MUTANT
 
Authors :  J. M. Phang, S. J. Harrop, A. P. Duff, K. E. Wilk, P. M. G. Curmi
Date :  03 Apr 13  (Deposition) - 09 Apr 14  (Release) - 09 Apr 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym./Biol. Unit :  A
Keywords :  Clic, Glutathione-S-Transferase Fold, Chloride Ion Channel, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. M. Phang, S. J. Harrop, A. P. Duff, K. E. Wilk, P. M. G. Curmi
Crystal Structure Analysis Of Clic1 C24 Mutants
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - CHLORIDE INTRACELLULAR CHANNEL PROTEIN 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PGEX-4T-1
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: CLIC1
    Gene: CLIC1, CLIC1 G6 NCC27, G6, NCC27
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: CHLORIDE CHANNEL ABP, NUCLEAR CHLORIDE ION CHANNEL 27, NCC27, REGULATORY NUCLEAR CHLORIDE ION CHANNEL PROTEIN, HRNCC

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric/Biological Unit (2, 2)
No.NameCountTypeFull Name
1ACT1Ligand/IonACETATE ION
2CA1Ligand/IonCALCIUM ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:196 , HOH A:782 , HOH A:783 , HOH A:784 , HOH A:787 , HOH A:790BINDING SITE FOR RESIDUE CA A 301
2AC2SOFTWAREGLY A:38 , ARG A:92 , LYS A:113BINDING SITE FOR RESIDUE ACT A 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4K0G)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Leu A:64 -Pro A:65
2Pro A:90 -Pro A:91

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4K0G)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4K0G)

(-) Exons   (0, 0)

(no "Exon" information available for 4K0G)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:237
                                                                                                                                                                                                                                                                             
               SCOP domains d4k0ga1 A:5-91 automated matches                                                       d4k0ga2 A:92-241 automated matches                                                                                                                     SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeee..........hhhhhhhhhhhhhhh...eeeee.....hhhhhhhh......eeee..eeeehhhhhhhhhhhhh...........hhhhhh..hhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhh.....................hhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4k0g A   5 QPQVELFVKAGSDGAKIGNSPFSQRLFMVLWLKGVTFNVTTVDTKRRTETVQKLCPGGQLPFLLYGTEVHTDTNKIEEFLEAVLCPPRYPKLAALNPESNTAGLDIFAKFSAYIKNSNPALNDNLEKGLLKALKVLDNYLTSPLPEEVDETSAEDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSNAYAREEFASTCPDDEEIELAYEQVAKALK 241
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (2, 2)

Asymmetric/Biological Unit
(-)
Class: All alpha proteins (14657)
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4K0G)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4K0G)

(-) Gene Ontology  (30, 30)

Asymmetric/Biological Unit(hide GO term definitions)

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  4k0g
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  CLIC1_HUMAN | O00299
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CLIC1_HUMAN | O00299: 1k0m 1k0n 1k0o 1rk4 3o3t 3p8w 3p90 3qr6 3swl 3tgz 3uvh 4iqa 4jzq 4k0n

(-) Related Entries Specified in the PDB File

4jzq 4k0n 4k1d