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(-) Description

Title :  CRYSTAL STRUCTURE OF BETA-KETOACYL SYNTHASE FROM BRUCELLA MELITENSIS IN COMPLEX WITH PLATENCIN
 
Authors :  Seattle Structural Genomics Center For Infectious Disease (S
Date :  25 Mar 13  (Deposition) - 22 May 13  (Release) - 05 Jun 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Ssgcid, Beta-Ketoacyl Synthase, Platencin, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Transferase-Antibiotic Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Abendroth, J. W. Fairman, D. Lorimer, T. Edwards
Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis In Complex With Platencin
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - BETA-KETOACYL SYNTHASE
    Chains: A
    EC Number: 2.3.1.41
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: AVA0421
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: FABB, BAB1_2173
    Organism Scientific: BRUCELLA MELITENSIS BIOVAR ABORTUS
    Organism Taxid: 359391
    Strain: 2308

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1CSU1Mod. Amino AcidCYSTEINE-S-SULFONIC ACID
2N321Ligand/Ion2,4-DIHYDROXY-3-({3-[(2S,4AS,8S,8AR)-8-METHYL-3-METHYLIDENE-7-OXO-1,3,4,7,8,8A-HEXAHYDRO-2H-2,4A-ETHANONAPHTHALEN-8-YL]PROPANOYL}AMINO)BENZOIC ACID
Biological Unit 1 (2, 4)
No.NameCountTypeFull Name
1CSU2Mod. Amino AcidCYSTEINE-S-SULFONIC ACID
2N322Ligand/Ion2,4-DIHYDROXY-3-({3-[(2S,4AS,8S,8AR)-8-METHYL-3-METHYLIDENE-7-OXO-1,3,4,7,8,8A-HEXAHYDRO-2H-2,4A-ETHANONAPHTHALEN-8-YL]PROPANOYL}AMINO)BENZOIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARECSU A:161 , MET A:202 , VAL A:268 , ALA A:269 , PRO A:270 , HIS A:296 , THR A:298 , THR A:300 , PRO A:301 , ALA A:302 , GLY A:303 , HIS A:333 , PHE A:391 , GLY A:392 , PHE A:393 , HOH A:697 , HOH A:699BINDING SITE FOR RESIDUE N32 A 500

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JV3)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4JV3)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4JV3)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4JV3)

(-) Exons   (0, 0)

(no "Exon" information available for 4JV3)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:407
                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains d4jv3a1 A:1-249 automated matches                                                                                                                                                                                                                        d4jv3a2 A:250-407 automated matches                                                                                                                            SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeeee.....hhhhhhhhhhhh....eehhhhhhhh....ee.....hhhhh.hhhhhh..hhhhhhhhhhhhhhhhhhh.hhhhhh...eeeeeee...hhhhhhhhhhhhhhhhhhhhh..hhhhhh.hhhhhhhhhhh.....ee...hhhhhhhhhhhhhhhhhhh....eeeeeeee..hhhhhhhhhhhh........hhhhh...............eeeeeeeeehhhhhhh.....eeeeeeeeee.........hhhhhhhhhhhhh.......eee........hhhhhhhhhhhhhhhhhhh.....hhhhhh.hhhhhhhhhhhhhhhhhhhhee.........hhhhh........ee.....eeeeeeee...eeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jv3 A   1 MRRVVVTGMGIVSSIGSNTEEVTASLREAKSGISRAEEYAELGFRCQVHGAPDIDIESLVDRRAMRFHGRGTAWNHIAMDQAIADAGLTEEEVSNERTGIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSAcATSNHCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVLFDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYGATSDGYDMVAPSGEGAIRCMKMALSTVTSKIDYINPHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRYQG 407
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160|      170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       
                                                                                                                                                                                          161-CSU
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 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JV3)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4JV3)

(-) Gene Ontology  (5, 5)

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UniProtKB/TrEMBL
        Q2YQQ9_BRUA2 | Q2YQQ9: 3lrf 3mqd 3u0e 3u0f

(-) Related Entries Specified in the PDB File

3lrf NATIVE PROTEIN RELATED ID: SSGCID-BRABA.00113.A RELATED DB: TARGETTRACK