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(-) Description

Title :  CRYSTAL STRUCTURE OF IRON UPTAKE ABC TRANSPORTER SUBSTRATE-BINDING PROTEIN PIUA FROM STREPTOCOCCUS PNEUMONIAE CANADA MDR_19A
 
Authors :  P. J. Stogios, Z. Wawrzak, M. Kudritska, V. Yim, A. Savchenko, W. F. Ande Center For Structural Genomics Of Infectious Diseases (Csgi
Date :  21 Feb 13  (Deposition) - 06 Mar 13  (Release) - 06 Mar 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.13
Chains :  Asym./Biol. Unit :  A
Keywords :  Center For Structural Genomics Of Infectious Diseases, Csgid, Niaid, National Institute Of Allergy And Infectious Diseases, Alpha And Beta Protein, Periplasmic Binding Protein Type Iii Fold, Iron Transport, Iron Uptake Abc Transport System Substrate Binding Protein, Transport Protein, Putative Membrane-Anchored Lipoprotein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. J. Stogios, Z. Wawrzak, M. Kudritska, V. Yim, A. Savchenko, W. F. Anderson, Center For Structural Genomics Of Infectious Diseases (Csgid)
Crystal Structure Of Iron Uptake Abc Transporter Substrate-Binding Protein Piua From Streptococcus Pneumonia Canada Mdr_19A
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - IRON-COMPOUND ABC TRANSPORTER, IRON-COMPOUND-BINDING PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: P15TV LIC
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 37-321
    Gene: MYY_1766
    Organism Scientific: STREPTOCOCCUS PNEUMONIAE
    Organism Taxid: 637987
    Strain: CANADA MDR_19A

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 5)

Asymmetric/Biological Unit (3, 5)
No.NameCountTypeFull Name
1CL1Ligand/IonCHLORIDE ION
2IPA1Ligand/IonISOPROPYL ALCOHOL
3SO43Ligand/IonSULFATE ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:243 , PHE A:244 , GLU A:245BINDING SITE FOR RESIDUE CL A 401
2AC2SOFTWARELYS A:55 , SER A:194 , ASP A:195 , LYS A:196 , HOH A:685BINDING SITE FOR RESIDUE SO4 A 402
3AC3SOFTWARELYS A:59 , LYS A:196 , HOH A:671 , HOH A:901BINDING SITE FOR RESIDUE SO4 A 403
4AC4SOFTWARELYS A:100 , ASN A:101 , HOH A:596 , HOH A:958 , HOH A:959 , HOH A:986BINDING SITE FOR RESIDUE SO4 A 404
5AC5SOFTWARELYS A:147 , ASP A:148BINDING SITE FOR RESIDUE IPA A 405

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4JCC)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4JCC)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:284
                                                                                                                                                                                                                                                                                                                            
               SCOP domains d4jcca_ A: automated matches                                                                                                                                                                                                                                                                 SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eee......eee......eee.hhhhhhhhhhh.hhh.eeee.....hhhhhhhhhhhee.......hhhhhhhh...eee.hhhhhhhhhhhhhhh.ee.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee..eeeee.....hhhhhh....ee...........ee.hhhhhhhhh..eeeeeehhhhh..hhhhhh....hhhhhhhhhhhh..eee.hhhhhhhh..hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4jcc A  37 SAPTEVTIKSSLDEVKLSKVPEKIVTFDLGAADTIRALGFAKNIVGMPTKTVPTYLKDLVGTVKNVGSMKEPDLEAIAALEPDLIIASPRTQKFVDKFKEIAPTVLFQASKDDYWTSTKANIESLASAFGETGTQKAKEELAKLDESIQEVATKNESSDKKALAILLNEGKMAAFGAKSRFSFLYQTLKFKPTDTKFEDSRHGQEVSFESVKEINPDILFVINRTLAIGGDNSSNDGVLENALIAETPAAKNGKIIQLTPDLWYLSGGGLESTKLMIEDIQKAL 320
                                    46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316
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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4JCC)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4JCC)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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