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(-)Asym./Biol. Unit
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(-) Description

Title :  AUTO-INHIBITED ERG ETS DOMAIN-DNA COMPLEX
 
Authors :  M. C. Regan, P. S. Horanyi, E. E. Pryor, J. L. Sarver, D. S. Cafiso, J. H. Bu
Date :  14 Jan 13  (Deposition) - 31 Jul 13  (Release) - 28 Aug 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.77
Chains :  Asym./Biol. Unit :  A,B,C
Keywords :  Winged Helix-Turn-Helix, Ets Domain, Dna Binding Protein-Dna Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. C. Regan, P. S. Horanyi, E. E. Pryor, J. L. Sarver, D. S. Cafiso, J. H. Bushweller
Structural And Dynamic Studies Of The Transcription Factor Erg Reveal Dna Binding Is Allosterically Autoinhibited.
Proc. Natl. Acad. Sci. Usa V. 110 13374 2013
PubMed-ID: 23898196  |  Reference-DOI: 10.1073/PNAS.1301726110

(-) Compounds

Molecule 1 - TRANSCRIPTIONAL REGULATOR ERG
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: ETS DOMAIN
    Gene: ERG
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: TRANSFORMING PROTEIN ERG
 
Molecule 2 - DNA (5'-D(*GP*AP*CP*CP*GP*GP*AP*AP*GP*TP*GP*G)-3')
    Chains: B
    Engineered: YES
    Other Details: SENSE DNA STRAND
    Synthetic: YES
 
Molecule 3 - DNA (5'-D(*CP*CP*AP*CP*TP*TP*CP*CP*GP*GP*TP*C)-3')
    Chains: C
    Engineered: YES
    Other Details: ANTI-SENSE DNA STRAND
    Synthetic: YES

 Structural Features

(-) Chains, Units

  123
Asymmetric/Biological Unit : ABC

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 4IRI)

(-) Sites  (0, 0)

(no "Site" information available for 4IRI)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4IRI)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4IRI)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4IRI)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4IRI)

(-) Exons   (0, 0)

(no "Exon" information available for 4IRI)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:94
                                                                                                                              
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhh.eee.....eeee.hhhhhhhhhhhhh.....hhhhhhhhhhhhhh...eee......eeeehhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------- Transcript
                 4iri A 292 GQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPH 385
                                   301       311       321       331       341       351       361       371       381    


Chain B from PDB  Type:DNA  Length:12
                                            
                 4iri B   1 GACCGGAAGTGG  12
                                    10  


Chain C from PDB  Type:DNA  Length:12
                                            
                 4iri C  13 CCACTTCCGGTC  24
                                    22
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4IRI)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4IRI)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4IRI)

(-) Gene Ontology  (22, 22)

Asymmetric/Biological Unit(hide GO term definitions)

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  4iri
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ERG_HUMAN | P11308: 1sxe 4irg 4irh

(-) Related Entries Specified in the PDB File

4irg 4irh