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(-) Description

Title :  STRUCTURE OF THE SPT16 MIDDLE DOMAIN REVEALS FUNCTIONAL FEATURES OF THE HISTONE CHAPERONE FACT
 
Authors :  D. J. Kemble, C. P. Hill
Date :  08 Jan 13  (Deposition) - 20 Feb 13  (Release) - 01 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.95
Chains :  Asym./Biol. Unit :  X
Keywords :  Spt16, Fact, Double Pleckstrin Homology Domain, H3-H4 Histones, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. J. Kemble, F. G. Whitby, H. Robinson, L. L. Mccullough, T. Formosa, C. P. Hill
Structure Of The Spt16 Middle Domain Reveals Functional Features Of The Histone Chaperone Fact.
J. Biol. Chem. V. 288 10188 2013
PubMed-ID: 23417676  |  Reference-DOI: 10.1074/JBC.C113.451369

(-) Compounds

Molecule 1 - FACT COMPLEX SUBUNIT SPT16
    Chains: X
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: MIDDLE DOMAIN (UNP RESIDUES 675-958)
    Gene: SPT16, CDC68, SSF1, YGL207W
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: CELL DIVISION CONTROL PROTEIN 68, FACILITATES CHROMATIN TRANSCRIPTION COMPLEX SUBUNIT SPT16, SUPPRESSOR OF TY PROTEIN 16

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : X

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1PO41Ligand/IonPHOSPHATE ION

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS X:725 , HIS X:743 , GLN X:756 , GLU X:867 , LYS X:894 , HOH X:1135 , HOH X:1238 , HOH X:1275BINDING SITE FOR RESIDUE PO4 X 1001

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 4IOY)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Arg X:686 -Pro X:687
2Pro X:858 -Pro X:859

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4IOY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4IOY)

(-) Exons   (0, 0)

(no "Exon" information available for 4IOY)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain X from PDB  Type:PROTEIN  Length:243
                                                                                                                                                                                                                                                                                   
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee.........eeeee...eeee...hhhhh.eeee...eeeeeee......eeeeeeeeeeeeee..eeeeeeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....eee.hhhhheee......eeeee...eeee......eeee...eeeeeee.......eeeeeeee.......eeeeeee..hhhhhhhhhhhh...eee......hhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4ioy X 677 TKRLDQIFVRPNPDTKRVPSTVFIHENGIRFQSPLRTDSRIDILFSNIKNLIFQSCKGELIVVIHIHLKNPILMGKKKIQDVQFYREASEDELEQEQEERRKRAALDKEFKYFADAIAEASNGLLTVENTFRDLGFQGVPNRSAVFCMPTTDCLVQLIEPPFLVINLEEVEICILERVQFGLKNFDMVFVYKDFNKPVTHINTVPIESLDFLKQWLTDMDIPYTVSTINLNWATIMKSLQDDP 941
                                   686       696       706       716       726       736       746       756       788       798       808       818       828       838       848       858       868       878       888       898       908       918       928       938   
                                                                                                                  765|                                                                                                                                                         
                                                                                                                   788
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4IOY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4IOY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4IOY)

(-) Gene Ontology  (22, 22)

Asymmetric/Biological Unit(hide GO term definitions)

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  SPT16_YEAST | P32558
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SPT16_YEAST | P32558: 3bip 3biq 3bit 4wnn

(-) Related Entries Specified in the PDB File

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