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(-) Description

Title :  STRUCTURE OF STRICTOSIDINE SYNTHASE IN COMPLEX WITH 2-(1-METHYL-1H-INDOL-3-YL)ETHANAMINE
 
Authors :  J. Stoeckigt, W. Fangrui, M. Wang, C. Rajendran
Date :  02 Jan 13  (Deposition) - 29 Jan 14  (Release) - 03 Aug 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.70
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Strictosidine Synthase, Strictosidine, Lyase-Lyase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Zhu, P. Kercmar, F. Wu, C. Rajendran, L. Sun, M. Wang, J. Stockigt
Using Strictosidine Synthase To Prepare Novel Alkaloids.
Curr. Med. Chem. 2015
PubMed-ID: 25850764

(-) Compounds

Molecule 1 - STRICTOSIDINE SYNTHASE
    Chains: A, B
    EC Number: 4.3.3.2
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: STR1
    Organism Common: DEVILPEPPER
    Organism Scientific: RAUVOLFIA SERPENTINA
    Organism Taxid: 4060

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
11ES1Ligand/Ion2-(1-METHYL-1H-INDOL-3-YL)ETHANAMINE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
11ES1Ligand/Ion2-(1-METHYL-1H-INDOL-3-YL)ETHANAMINE
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
11ES-1Ligand/Ion2-(1-METHYL-1H-INDOL-3-YL)ETHANAMINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:208 , GLY A:254 , MET A:276 , GLU A:309BINDING SITE FOR RESIDUE 1ES A 401

(-) SS Bonds  (2, 2)

Asymmetric Unit
No.Residues
1A:89 -A:101
2B:89 -B:101

(-) Cis Peptide Bonds  (3, 3)

Asymmetric Unit
No.Residues
1Pro A:70 -Asn A:71
2Leu A:111 -Gln A:112
3Gln A:112 -Asn A:113

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4IMB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4IMB)

(-) Exons   (0, 0)

(no "Exon" information available for 4IMB)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:301
                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeee........ee.......eeee....eeeee......eeeeee.....hhhhhh...hhhhhhhhh.eeeeeee....eeeeee...eeeeee...ee.eeee.ee..ee...eeeeee......eeeee........hhhhhhhhh...eeeeeee....eeeeeeeee....eeee.....eeeeee....eeeeee........eeeeee...eeeeee.....eeeeeeee........eeeeeeee.....eeeeee...........eeeee..eeeee.....eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4imb A  32 KEILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILV 332
                                    41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331 


Chain B from PDB  Type:PROTEIN  Length:301
                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee........ee.......eeee....eeeee......eeeeee.....hhhhhh...hhhhhhhhh.eeeeeee....eeeeee...eeeeee...ee.eeee.ee..ee...eeeeee......eeeee........hhhhhhhh....eeeeeee....eeeeeeeee..eeeeee.....eeeeee....eeeeee........eeeeee...eeeeee.....eeeeeeee........eeeeeeee.....eeeeee...........eeeee..eeeee.....eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4imb B  33 EILIEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPNPGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVY 333
                                    42        52        62        72        82        92       102       112       122       132       142       152       162       172       182       192       202       212       222       232       242       252       262       272       282       292       302       312       322       332
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4IMB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4IMB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4IMB)

(-) Gene Ontology  (5, 5)

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        STSY_RAUSE | P68175: 2fp8 2fp9 2fpb 2fpc 2v91 2vaq 3v1s 4iyg

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