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(-) Description

Title :  CRYSTAL STRUCTURE OF PHOSPHOLIPASE A1 FROM STREPTOMYCES ALBIDOFLAVUS NA297
 
Authors :  K. Murayama, D. Sugimori
Date :  14 Nov 12  (Deposition) - 29 May 13  (Release) - 29 May 13  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.75
Chains :  Asym./Biol. Unit :  A
Keywords :  Lipase, Glycerophospholipid, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  K. Murayama, K. Kano, Y. Matsumoto, D. Sugimori
Crystal Structure Of Phospholipase A1 From Streptomyces Albidoflavus Na297
J. Struct. Biol. V. 182 192 2013
PubMed-ID: 23416196  |  Reference-DOI: 10.1016/J.JSB.2013.02.003

(-) Compounds

Molecule 1 - PHOSPHOLIPASE A1
    Chains: A
    EC Number: 3.1.1.32
    Engineered: YES
    Expression System: STREPTOMYCES LIVIDANS
    Expression System Plasmid: PUC702/PLA
    Expression System Taxid: 1916
    Expression System Vector Type: PLASMID
    Organism Scientific: STREPTOMYCES ALBIDOFLAVUS
    Organism Taxid: 1886
    Strain: NA297

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
11PE1Ligand/IonPENTAETHYLENE GLYCOL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETYR A:12 , SER A:54 , GLY A:82 , ASN A:83 , PHE A:87 , ALA A:88 , TYR A:142 , ASN A:214 , SER A:216 , HIS A:218 , HOH A:503BINDING SITE FOR RESIDUE 1PE A 301

(-) SS Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1A:28 -A:53
2A:94 -A:102
3A:152 -A:199

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4HYQ)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4HYQ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4HYQ)

(-) Exons   (0, 0)

(no "Exon" information available for 4HYQ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:236
                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeehhhhhh......hhhhhhhh....hhhhhhhhhhh..eeee......hhhhhhhhh.......eeeeeee......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...eeeee................hhhhhhhhhhhhhhhhhhhhhhhhhh..eeehhhhhh..........................hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4hyq A   1 AAGGYVALGDSYSSGVGAGSYDSGSGDCRRTPKAYPALWAAANSPASFDFVACSGAVTSDVLNKQMGPLNSSTSLVSLTIGGNDAGFADVMTTCVLQSEANCIARVNTAKAFVESTLPGRLDSVYSQVRAKAPSANVVVLGYPRFYKLNGTCVAGLTEGERTAINGAADLLNSVISKRAADHGYAYGDIAAAFTGHEICSGDSWLHSVKWTGINDSYHPTAAGQSGGYLPVLNSKA 236
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4HYQ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4HYQ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4HYQ)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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