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(-) Description

Title :  CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAIN OF TXNIP
 
Authors :  J. Hwang, M. H. Kim
Date :  04 Aug 12  (Deposition) - 05 Feb 14  (Release) - 05 Feb 14  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Arrestin-Like Fold, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Hwang, H. W. Suh, Y. H. Jeon, E. Hwang, L. T. Nguyen, J. Yeom, S. G. Lee, C. Lee, K. J. Kim, B. S. Kang, J. O. Jeong, T. K. Oh, I. Choi, J. O. Lee, M. H. Kim
The Structural Basis For The Negative Regulation Of Thioredoxin By Thioredoxin-Interacting Protein.
Nat Commun V. 5 2958 2014
PubMed-ID: 24389582  |  Reference-DOI: 10.1038/NCOMMS3958

(-) Compounds

Molecule 1 - THIOREDOXIN-INTERACTING PROTEIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: N-TERMINAL DOMAIN (UNP RESIDUES 4-154)
    Gene: TXNIP, VDUP1
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: TXNIP, THIOREDOXIN-BINDING PROTEIN 2, TBP-2, VITAMIN D3 UP- REGULATED PROTEIN 1, VDUP1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1GOL1Ligand/IonGLYCEROL

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:39 , ARG A:40 , GLN A:107 , GLN A:134 , HOH A:923 , HOH A:955BINDING SITE FOR RESIDUE GOL A 801

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:63 -A:120

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 4GFX)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 4GFX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 4GFX)

(-) Exons   (0, 0)

(no "Exon" information available for 4GFX)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:151
                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee...........eeeeeeeeee...eee.eeeeeeeeee.eeee..eeeee.....eeeeee.............eee.....eeeeeeee......eeee...ee.eeeeeeeeeee..eeeeeeeeee....eee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 4gfx A   4 VAAIKSFEVVFNDPEKVYGSGEKVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQGSQQCKQTSEYLRYEDTLLLEDQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGCVDYWVKAFLDRPSQPTQETKKNFEVVDLVDVNTP 154
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 4GFX)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 4GFX)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 4GFX)

(-) Gene Ontology  (27, 27)

Asymmetric/Biological Unit(hide GO term definitions)

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  4gfx
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  TXNIP_HUMAN | Q9H3M7
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  TXNIP_HUMAN | Q9H3M7
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TXNIP_HUMAN | Q9H3M7: 4gei 4gej 4ll1 4ll4 4rof 4roj 5cq2 5df6 5dws 5dzd

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 4GFX)